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FASTA Sequence PDB Format mmCIF Format
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3M85

Archaeoglobus fulgidus exosome y70a with rna bound to the active site

PDB DOI: 10.2210/pdb3m85/pdb

Classification: HYDROLASE/RNA
Organism(s): Archaeoglobus Fulgidus , Synthetic Construct

Deposited: 2010-03-17
Deposition Author(s): Hartung, S. , Hopfner, K.-P.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3 Å

3m85
Literature

Archaeoglobus fulgidus exosome y70a with rna bound to the active site

Hartung, S. , Hopfner, K.-P.

Primary Citation of Related Structures: 3M85


Proteins
Molecule Chains Sequence Length Organism Sequence
Putative uncharacterized protein AF_0206 A 179 Archaeoglobus Fulgidus , Synthetic Construct MRFVMPGDRIGSAEEYVKGEGVYEEGGELFAAVAGKLIIKDRVAKVESISPIPEIVKGDVVLGRVVDLRNSIALIEVSSKKGENRGPSNRGIGILHVSNVDEGYVKEISEAVGYLDILKARVIGDNLRLSTKEEEMGVLRALCSNCKTEMVREGDILKCPECGRVEKRKISTDYGKGEW
Putative uncharacterized protein AF_0206 B 179 Archaeoglobus Fulgidus , Synthetic Construct MRFVMPGDRIGSAEEYVKGEGVYEEGGELFAAVAGKLIIKDRVAKVESISPIPEIVKGDVVLGRVVDLRNSIALIEVSSKKGENRGPSNRGIGILHVSNVDEGYVKEISEAVGYLDILKARVIGDNLRLSTKEEEMGVLRALCSNCKTEMVREGDILKCPECGRVEKRKISTDYGKGEW
Putative uncharacterized protein AF_0206 C 179 Archaeoglobus Fulgidus , Synthetic Construct MRFVMPGDRIGSAEEYVKGEGVYEEGGELFAAVAGKLIIKDRVAKVESISPIPEIVKGDVVLGRVVDLRNSIALIEVSSKKGENRGPSNRGIGILHVSNVDEGYVKEISEAVGYLDILKARVIGDNLRLSTKEEEMGVLRALCSNCKTEMVREGDILKCPECGRVEKRKISTDYGKGEW
Probable exosome complex exonuclease 1 D 258 Archaeoglobus Fulgidus , Synthetic Construct MSEFNEKPEKLIVDGLRLDGRKFDELRPIKIEASVLKRADGSCYLEMGKNKVIAAVFGPREVHPEHLQDPSKAIIRYRYNMAPFSVEERKRPGPDRRSIEISKVSKEAFEAVIMKELFPRSAIDIFVEVLQADAGSRTACLNAASVALVDAGVPMKGMITSVAVGKADGQLVLDPMKEEDNFGEADMPFAFLIRNGKIESIALLQMDGRMTRDEVKQAIELAKKGALQIYEMQREAILRRYIEVGEEMDEITEGGEDA
Probable exosome complex exonuclease 1 E 258 Archaeoglobus Fulgidus , Synthetic Construct MSEFNEKPEKLIVDGLRLDGRKFDELRPIKIEASVLKRADGSCYLEMGKNKVIAAVFGPREVHPEHLQDPSKAIIRYRYNMAPFSVEERKRPGPDRRSIEISKVSKEAFEAVIMKELFPRSAIDIFVEVLQADAGSRTACLNAASVALVDAGVPMKGMITSVAVGKADGQLVLDPMKEEDNFGEADMPFAFLIRNGKIESIALLQMDGRMTRDEVKQAIELAKKGALQIYEMQREAILRRYIEVGEEMDEITEGGEDA
Probable exosome complex exonuclease 1 F 258 Archaeoglobus Fulgidus , Synthetic Construct MSEFNEKPEKLIVDGLRLDGRKFDELRPIKIEASVLKRADGSCYLEMGKNKVIAAVFGPREVHPEHLQDPSKAIIRYRYNMAPFSVEERKRPGPDRRSIEISKVSKEAFEAVIMKELFPRSAIDIFVEVLQADAGSRTACLNAASVALVDAGVPMKGMITSVAVGKADGQLVLDPMKEEDNFGEADMPFAFLIRNGKIESIALLQMDGRMTRDEVKQAIELAKKGALQIYEMQREAILRRYIEVGEEMDEITEGGEDA
Probable exosome complex exonuclease 2 G 259 Archaeoglobus Fulgidus , Synthetic Construct MPEDILVDIKRDYVLSKLRDNERIDGRGFDEFRKVEIIPNVIEKAEGSALVKLGDTQVVVGVKMQPGEPAPDTPDRGVIIVNAELVPLASPTFEPGPPDENSIELARVVDRGIRESEAVDLSKLVIEEGEKVWIVFVDIHALDDDGNLLDASALAAIAALMNTKVPAERFDLGEDYLLPVRDLPVSVTSLIVGNKYLVDPSREEMSVGDTTLTITTDKDDNVVAMQKSGGYLLDEKLFDELLDVSINCARKLREKFKEI
Probable exosome complex exonuclease 2 H 259 Archaeoglobus Fulgidus , Synthetic Construct MPEDILVDIKRDYVLSKLRDNERIDGRGFDEFRKVEIIPNVIEKAEGSALVKLGDTQVVVGVKMQPGEPAPDTPDRGVIIVNAELVPLASPTFEPGPPDENSIELARVVDRGIRESEAVDLSKLVIEEGEKVWIVFVDIHALDDDGNLLDASALAAIAALMNTKVPAERFDLGEDYLLPVRDLPVSVTSLIVGNKYLVDPSREEMSVGDTTLTITTDKDDNVVAMQKSGGYLLDEKLFDELLDVSINCARKLREKFKEI
Probable exosome complex exonuclease 2 I 259 Archaeoglobus Fulgidus , Synthetic Construct MPEDILVDIKRDYVLSKLRDNERIDGRGFDEFRKVEIIPNVIEKAEGSALVKLGDTQVVVGVKMQPGEPAPDTPDRGVIIVNAELVPLASPTFEPGPPDENSIELARVVDRGIRESEAVDLSKLVIEEGEKVWIVFVDIHALDDDGNLLDASALAAIAALMNTKVPAERFDLGEDYLLPVRDLPVSVTSLIVGNKYLVDPSREEMSVGDTTLTITTDKDDNVVAMQKSGGYLLDEKLFDELLDVSINCARKLREKFKEI

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-R(*CP*UP*CP*CP*CP*C)-3' x 6 NA CUCCCC
5'-R(*CP*UP*CP*CP*CP*C)-3' y 6 NA CUCCCC
5'-R(*CP*UP*CP*CP*CP*C)-3' z 6 NA CUCCCC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2010-03-17
Deposition Author(s): Hartung, S. , Hopfner, K.-P.