PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

3LZJ

Rb69 dna polymerase (y567a) ternary complex with dctp opposite 7,8-dihydro-8-oxoguanine

PDB DOI: 10.2210/pdb3lzj/pdb

Classification: TRANSFERASE/DNA
Organism(s): Enterobacteria Phage Rb69 , Synthetic Construct

Deposited: 2010-03-01
Deposition Author(s): Beckman, J. , Blaha, G. , Konigsberg, W.H. , Wang, J. , Wang, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.05 Å

3lzj
Literature

Rb69 dna polymerase (y567a) ternary complex with dctp opposite 7,8-dihydro-8-oxoguanine

Beckman, J. , Blaha, G. , Konigsberg, W.H. , Wang, J. , Wang, M.

Primary Citation of Related Structures: 3LZJ


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase A 903 Enterobacteria Phage Rb69 , Synthetic Construct MKEFYLTVEQIGDSIFERYIDSNGRERTREVEYKPSLFAHCPESQATKYFDIYGKPCTRKLFANMRDASQWIKRMEDIGLEALGMDDFKLAYLSDTYNYEIKYDHTKIRVANFDIEVTSPDGFPEPSQAKHPIDAITHYDSIDDRFYVFDLLNSPYGNVEEWSIEIAAKLQEQGGDEVPSEIIDKIIYMPFDNEKELLMEYLNFWQQKTPVILTGWNVESFAIPYVYNRIKNIFGESTAKRLSPHRKTRVKVIENMYGSREIITLFGISVLDYIDLYKKFSFTNQPSYSLDYISEFELNVGKLKYDGPISKLRESNHQRYISYNIIAVYRVLQIDAKRQFINLSLDMGYYAKIQIQSVFSPIKTWDAIIFNSLKEQNKVIPQGRSHPVQPYPGAFVKEPIPNRYKYVMSFDLTSLYPSIIRQVNISPETIAGTFKVAPLHDYINAVAERPSDVYSCSPNGMMYYKDRDGVVPTEITKVFNQRKEHKGYMLAAQRNGEIIKEALHNPNLSVDEPLDVDYRFDFSDEIKEKIKKLSAKSLNEMLFRAQRTEVAGMTAQINRKLLINSLAGALGNVWFRYYDLRNATAITTFGQMALQWIERKVNEYLNEVCGTEGEAFVLYGDTDSIYVSADKIIDKVGESKFRDTNHWVDFLDKFARERMEPAIDRGFREMCEYMNNKQHLMFMDREAIAGPPLGSKGIGGFWTGKKRYALNVWDMEGTRYAEPKLKIMGLETQKSSTPKAVQKALKECIRRMLQEGEESLQEYFKEFEKEFRQLNYISIASVSSANNIAKYDVGGFPGPKCPFHIRGILTYNRAIKGNIDAPQVVEGEKVYVLPLREGNPFGDKCIAWPSGTEITDLIKDDVLHWMDYTVLLEKTFIKPLEGFTSAAKLDYEKKASLFDMFDF

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*TP*CP*AP*(8OG)P*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3') t 18 NA TCAGGTAAGCAGTCCGCG
DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*(DOC))-3') p 13 NA GCGGACTGCTTAC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2010-03-01
Deposition Author(s): Beckman, J. , Blaha, G. , Konigsberg, W.H. , Wang, J. , Wang, M.