PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

3LWM

Structure of the large fragment of thermus aquaticus dna polymerase i in complex with a blunt-ended dna and ddatp

PDB DOI: 10.2210/pdb3lwm/pdb

Classification: TRANSFERASE/DNA
Organism(s): Thermus Aquaticus , Synthetic Construct

Deposited: 2010-02-24
Deposition Author(s): Diederichs, K. , Marx, A. , Obeid, S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.186 Å

3lwm
Literature

Structure of the large fragment of thermus aquaticus dna polymerase i in complex with a blunt-ended dna and ddatp

Diederichs, K. , Marx, A. , Obeid, S.

Primary Citation of Related Structures: 3LWM


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase I, thermostable A 540 Thermus Aquaticus , Synthetic Construct ALEEAPWPPPEGAFVGFVLSRKEPMWADLLALAAARGGRVHRAPEPYKALRDLKEARGLLAKDLSVLALREGLGLPPGDDPMLLAYLLDPSNTTPEGVARRYGGEWTEEAGERAALSERLFANLWGRLEGEERLLWLYREVERPLSAVLAHMEATGVRLDVAYLRALSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERVLFDELGLPAIGKTEKTGKRSTSAAVLEALREAHPIVEKILQYRELTKLKSTYIDPLPDLIHPRTGRLHTRFNQTATATGRLSSSDPNLQNIPVRTPLGQRIRRAFIAEEGWLLVALDYSQIELRVLAHLSGDENLIRVFQEGRDIHTETASWMFGVPREAVDPLMRRAAKTINFGVLYGMSAHRLSQELAIPYEEAQAFIERYFQSFPKVRAWIEKTLEEGRRRGYVETLFGRRRYVPDLEARVKSVREAAERMAFNMPVQGTAADLMKLAMVKLFPRLEEMGARMLLQVHDELVLEAPKERAEAVARLAKEVMEGVYPLAVPLEVEVGIGEDWLSAKE

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(2DA))-3') b 12 NA GACCACGGCGCA
DNA (5'-D(*TP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3') c 12 NA TGCGCCGTGGTC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2010-02-24
Deposition Author(s): Diederichs, K. , Marx, A. , Obeid, S.