PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

3LDB

Structure of jmjd6 complexd with alpha-ketoglutarate and fab fragment.

PDB DOI: 10.2210/pdb3ldb/pdb

Classification: IMMUNE SYSTEM
Organism(s): Escherichia Coli 'Bl21-Gold(De3)Plyss Ag' , Salmonella Enterica

Deposited: 2010-01-12
Deposition Author(s): Hong, X. , Kappler, J.W. , Wang, C. , White, J. , Zang, J. , Zhang, G.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.7 Å

3ldb
Literature

Structure of jmjd6 complexd with alpha-ketoglutarate and fab fragment.

Hong, X. , Kappler, J.W. , Wang, C. , White, J. , Zang, J. , Zhang, G.

Primary Citation of Related Structures: 3LDB


Proteins
Molecule Chains Sequence Length Organism Sequence
Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 A 334 Escherichia Coli 'Bl21-Gold(De3)Plyss Ag' , Salmonella Enterica MNHKSKKRIREAKRSARPELKDSLDWTRHNYYESFSLSPAAVADNVERADALQLSVEEFVERYERPYKPVVLLNAQEGWSAQEKWTLERLKRKYRNQKFKCGEDNDGYSVKMKMKYYIEYMESTRDDSPLYIFDSSYGEHPKRRKLLEDYKVPKFFTDDLFQYAGEKRRPPYRWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTNFPVVWHKTVRGRPKLSRKWYRILKQEHPELAVLADSVDLQE
antibody Fab fragment light chain B 220 Escherichia Coli 'Bl21-Gold(De3)Plyss Ag' , Salmonella Enterica DIVMTQSPSSLAVSAGEKVTMSCRSSQSLYYSGIKKNLLAWYQLKPGQSPKLLIYYASTLFTGVPDRFTGSGSGTDYTLTITSVQAEDMGQYFCQQGISNPYTFGAGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTAAIVKTLNRNEC
antibody Fab fragment heavy chain C 221 Escherichia Coli 'Bl21-Gold(De3)Plyss Ag' , Salmonella Enterica QIQLQESGPGLVTPSQSLTLTCSVTGDSITSYHWSWIRQFPGKKLEWMGYIYNSGGTDYNPSLKSRVSITREISRNQLFLQLNSVTTEDTATYYCARRDYGTYYFDYWGQGTMVTVSSATTTAPSVYPLAPACDSTTSTTNTVTLGCLVKGYFPEPVTVSWNSGALTSGVHTFPSVLHSGLYSLSSSVTVPSSTWPSQTVTCNVAHPASSTKVDKKIVPGD
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2010-01-12
Deposition Author(s): Hong, X. , Kappler, J.W. , Wang, C. , White, J. , Zang, J. , Zhang, G.