3L4J
Topoisomerase ii-dna cleavage complex, apo
PDB DOI: 10.2210/pdb3l4j/pdb
Classification: Isomerase/DNA Organism(s): Saccharomyces Cerevisiae , Synthetic Construct
Deposited: 2009-12-20 Deposition Author(s): Berger, J.M. , Burgin, A.B. , Deweese, J.E. , Osheroff, N. , Schmidt, B.H.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.48 Å
Topoisomerase ii-dna cleavage complex, apo
Berger, J.M. , Burgin, A.B. , Deweese, J.E. , Osheroff, N. , Schmidt, B.H.
Primary Citation of Related Structures: 3L4J
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA topoisomerase 2 | A | 757 | Saccharomyces Cerevisiae , Synthetic Construct | SRITNYPKLEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNVREASADQILKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTDQDHDGSHIKGLIINFLESSFPGLLDIQGFLLEFITPIIKVSITKPTKNTIAFYNMPDYEKWREEESHKFTWKQKYYKGLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWLRQYEPGTVLDPTLKEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCFKKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIYLLLPNGAFGTRATGGKDAAAARYIYTELNKLTRKIFHPADDPLYKYIQEDEKTVEPEWYLPILPMILVNGAEGIGTGWSTYIPPFNPLEIIKNIRHLMNDEELEQMHPWFRGWTGTIEEIEPLRYRMYGRIEQIGDNVLEITELPARTWTSTIKEYLLLGLSGNDKIKPWIKDMEEQHDDNIKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSVNEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQELENLGFPRFNKEGKPYYGSPNDEIAEQINDVKGATSDEEDEESSHEDTENVINGPEELYGTYEYLLGMRIWSLTKERYQKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRDAEAR |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(P*CP*CP*TP*AP*CP*TP*GP*CP*TP*AP*C)-3') | b | 11 | NA | CCTACTGCTAC |
| DNA (5'-D(*CP*GP*CP*GP*GP*TP*AP*GP*CP*AP*GP*TP*AP*GP*G)-3') | c | 15 | NA | CGCGGTAGCAGTAGG |
| DNA (5'-D(P*GP*GP*AP*TP*GP*AP*CP*GP*AP*TP*)-3') | d | 10 | NA | GGATGACGAT |
| DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*CP*GP*TP*CP*AP*TP*CP*C)-3') | e | 15 | NA | CGCGAATCGTCATCC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2009-12-20 Deposition Author(s): Berger, J.M. , Burgin, A.B. , Deweese, J.E. , Osheroff, N. , Schmidt, B.H.