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3KPR
Crystal structure of the lc13 tcr in complex with hla b*4405 bound to eeylkawtf a mimotope
PDB DOI: 10.2210/pdb3kpr/pdb
Classification: IMMUNE SYSTEM Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2009-11-16 Deposition Author(s): Archbold, J.K. , Bharadwaj, M. , Brooks, A.G. , Burrows, S.R. , Chen, Z. , Clements, C.S. , Crawford, F. , Gras, S. , Jackson, D. , Kappler, J.W. , Kjer-Nielsen, L. , Macdonald, W.A. , Mccluskey, J. , Purcell, A.W. , Rossjohn, J. , Saunders, P.M. , Stadinsky, B. , Tynan, F.E. , Wilce, M.C.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.6 Å
Crystal structure of the lc13 tcr in complex with hla b*4405 bound to eeylkawtf a mimotope
Archbold, J.K. , Bharadwaj, M. , Brooks, A.G. , Burrows, S.R. , Chen, Z. , Clements, C.S. , Crawford, F. , Gras, S. , Jackson, D. , Kappler, J.W. , Kjer-Nielsen, L. , Macdonald, W.A. , Mccluskey, J. , Purcell, A.W. , Rossjohn, J. , Saunders, P.M. , Stadinsky, B. , Tynan, F.E. , Wilce, M.C.
Primary Citation of Related Structures: 3KPR
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| HLA class I histocompatibility antigen, B-44 alpha chain | A | 276 | Homo Sapiens , Synthetic Construct | GSHSMRYFYTAMSRPGRGEPRFITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRENLRTALRYYNQSEAGSHIIQRMYGCDVGPDGRLLRGYDQYAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQDRAYLEGLCVESLRRYLENGKETLQRADPPKTHVTHHPISDHEVTLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP |
| HLA class I histocompatibility antigen, B-44 alpha chain | F | 276 | Homo Sapiens , Synthetic Construct | GSHSMRYFYTAMSRPGRGEPRFITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRENLRTALRYYNQSEAGSHIIQRMYGCDVGPDGRLLRGYDQYAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQDRAYLEGLCVESLRRYLENGKETLQRADPPKTHVTHHPISDHEVTLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP |
| Beta-2-microglobulin | B | 99 | Homo Sapiens , Synthetic Construct | IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM |
| Beta-2-microglobulin | G | 99 | Homo Sapiens , Synthetic Construct | IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM |
| EEYLKAWTF, mimotope peptide | C | 9 | Homo Sapiens , Synthetic Construct | EEYLKAWTF |
| EEYLKAWTF, mimotope peptide | H | 9 | Homo Sapiens , Synthetic Construct | EEYLKAWTF |
| LC13 TCR alpha chain | D | 201 | Homo Sapiens , Synthetic Construct | KTTQPNSMESNEEEPVHLPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLTSNVNNRMASLAIAEDRKSSTLILHRATLRDAAVYYCILPLAGGTSYGKLTFGQGTILTVHPNIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKTVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPS |
| LC13 TCR alpha chain | I | 201 | Homo Sapiens , Synthetic Construct | KTTQPNSMESNEEEPVHLPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLTSNVNNRMASLAIAEDRKSSTLILHRATLRDAAVYYCILPLAGGTSYGKLTFGQGTILTVHPNIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKTVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPS |
| LC13 TCR beta chain | E | 241 | Homo Sapiens , Synthetic Construct | GVSQSPRYKVAKRGQDVALRCDPISGHVSLFWYQQALGQGPEFLTYFQNEAQLDKSGLPSDRFFAERPEGSVSTLKIQRTQQEDSAVYLCASSLGQAYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD |
| LC13 TCR beta chain | J | 241 | Homo Sapiens , Synthetic Construct | GVSQSPRYKVAKRGQDVALRCDPISGHVSLFWYQQALGQGPEFLTYFQNEAQLDKSGLPSDRFFAERPEGSVSTLKIQRTQQEDSAVYLCASSLGQAYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2009-11-16 Deposition Author(s): Archbold, J.K. , Bharadwaj, M. , Brooks, A.G. , Burrows, S.R. , Chen, Z. , Clements, C.S. , Crawford, F. , Gras, S. , Jackson, D. , Kappler, J.W. , Kjer-Nielsen, L. , Macdonald, W.A. , Mccluskey, J. , Purcell, A.W. , Rossjohn, J. , Saunders, P.M. , Stadinsky, B. , Tynan, F.E. , Wilce, M.C.