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3K5L

Crystal structure of e.coli pol ii-abasic dna-datp lt(0, 3) ternary complex

PDB DOI: 10.2210/pdb3k5l/pdb

Classification: TRANSFERASE/DNA
Organism(s): Escherichia Coli , Synthetic Construct

Deposited: 2009-10-07
Deposition Author(s): Wang, F. , Yang, W.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.7 Å

Literature

Crystal structure of e.coli pol ii-abasic dna-datp lt(0, 3) ternary complex

Wang, F. , Yang, W.

Primary Citation of Related Structures: 3K5L


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase II A 786 Escherichia Coli , Synthetic Construct GPHMAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKNCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*TP*AP*TP*(3DR)P*GP*TP*AP*CP*GP*CP*TP*AP*GP*GP*CP*AP*CP*A)-3') t 18 NA TATNGTACGCTAGGCACA
DNA (5'-D(*GP*TP*GP*CP*CP*TP*AP*GP*CP*GP*TP*AP*(DOC))-3') p 13 NA GTGCCTAGCGTAC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2009-10-07
Deposition Author(s): Wang, F. , Yang, W.