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3K0J

Crystal structure of the e. coli thim riboswitch in complex with thiamine pyrophosphate and the u1a crystallization module

PDB DOI: 10.2210/pdb3k0j/pdb

Classification: RNA/RNA BINDING PROTEIN
Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2009-09-24
Deposition Author(s): Edwards, T.E. , Ferre-D'Amare, A.R. , Kulshina, N.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.1 Å

3k0j
Literature

Crystal structure of the e. coli thim riboswitch in complex with thiamine pyrophosphate and the u1a crystallization module

Edwards, T.E. , Ferre-D'Amare, A.R. , Kulshina, N.

Primary Citation of Related Structures: 3K0J


Proteins
Molecule Chains Sequence Length Organism Sequence
U1 small nuclear ribonucleoprotein A A 96 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) AVPETRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKM
U1 small nuclear ribonucleoprotein A B 96 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) AVPETRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKM
U1 small nuclear ribonucleoprotein A C 96 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) AVPETRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKM
U1 small nuclear ribonucleoprotein A D 96 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) AVPETRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKM

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (87-MER) e 87 NA GCGACUCGGGGUGCCCUCCAUUGCACUCCGGAGGCUGAGAAAUACCCGUAUCACCUGAUCUGGAUAAUGCCAGCGUAGGGAAGUCGC
RNA (87-MER) f 87 NA GCGACUCGGGGUGCCCUCCAUUGCACUCCGGAGGCUGAGAAAUACCCGUAUCACCUGAUCUGGAUAAUGCCAGCGUAGGGAAGUCGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2009-09-24
Deposition Author(s): Edwards, T.E. , Ferre-D'Amare, A.R. , Kulshina, N.