Two heavy meromyosin interacting-heads motifs flexible docked into tarantula thick filament 3d-map allows in depth study of intra- and intermolecular interactions
PDB DOI: 10.2210/pdb3jbh/pdb
Classification: CONTRACTILE PROTEIN Organism(s): Aphonopelma
Deposited: 2015-09-01 Deposition Author(s): Alamo, L. , Bilbao, A. , Gillilan, R.E. , Hu, S. , Padron, R. , Pinto, A. , Qi, D. , Wriggers, W. , Zhu, J.
Two heavy meromyosin interacting-heads motifs flexible docked into tarantula thick filament 3d-map allows in depth study of intra- and intermolecular interactions
Alamo, L. , Bilbao, A. , Gillilan, R.E. , Hu, S. , Padron, R. , Pinto, A. , Qi, D. , Wriggers, W. , Zhu, J.
Primary Citation of Related Structures: 3JBH
Proteins | ||||
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Molecule | Chains | Sequence Length | Organism | Sequence |
MYOSIN 2 HEAVY CHAIN STRIATED MUSCLE | A | 1953 | Aphonopelma | MAEDPDPTEYLYISMEQKRKDQTKPYDGKKMVWVADEKEGYLLGLIKSTQGDICTVDIEGQESRQVKKDLLQQVNPPKYEKCEDMSNLTYLNDASVLHNLKQRYYANLIYTYSGLFCVAINPYKRFPIYTNRTVQIYKGRRRTEVPPHLFAISDGAYSAMLANRENQSMLITGESGAGKTENTKKVIAYYANVGAATPKPGKEAPTKEKKATLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPMGKLAGADIETYLLEKARVISQQTLERSYHIFYQLMSGGIENLKADLLLSDDIYDYHFVSQGKIEIPGVDDAEELRLTDTAFDILGFSHEYKTDVYKITASCMHLGEMKFKQRPREEQAEADGTEEGERVAHLLGVNAADLYKNLVKPKIKVGNEMVTQGRNATQVSYSVGGLAKAMFDRTFKWLVKRLNETLDTKQKRQYFIGVLDIAGFEIFDYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYKREGIDWVFIDFGLDLAACIELIEKPMGILSILEEESMFPKATDKSFQDKLNANHLGKSPNFVKPKPPKPGQQEAHFSIAHYAGTVPYNITGWLEKNKDPVNDTVVDQFKKGSNKLVQEIFEDHPGLGAEEKGGGGKGGGGRKKGASFQTVSALYREQLNRLMASLHSTQPHFVRCIIPNELKQPGVIDSGLVMHQLTCNGVLEGIRICRKGFPNRMVYPDFKQRYTILAASAVPKGFVDAKKVTEAVLGAIQLDANDYRLGNTKVFFRAGVLGRLEEMRDDRLGKIVTWLQAWIRWYLSKKEFKKLQEQRVALLVIQRNLRKFLTLRNWLWYKLYIKVKPLLTMAKVEDELKALEEKLKKALESLEKEEKVRKDIEVQNVKLLQEKNDLFLQLESERSGAGDVEERLTKAISMKNDLEGQVQELQERLSREEDAHSNLSSVRKKLDGEISNLKKEIEDLQLVIQKTEQDKAAKDHQIRNLNDEIAHQDELINKLNREKKQMQEMGQKTGEDLQATEDKLNHMNKVKAKLEQTLDELEDSLEREKKLRGDVEKTKRKVEGDLKLAQEAVADLEKNKKELEQALQRKEKEMASLSAKLEDEQGLVAKLQKQIKELQARIEELEEELEAERQARAKAEKQRADLAREIEELSERLEEAGGATSAQVELNKRREAEMAKLRRDLEESNIQHEQTLANLRKKHNDVVAELSEQIDQLNKHKARLEKEKAQMKGELDDVRSSVDHVNKEKANAEKQAKQLEMQLTELQGKMDEAHRSLGDFDAAKKRLTVENTELTRQLEDAESQVSQLSKLKTSLQTQLEDTKRMADEESRERATAMGKFRSVEHDLDSLREQIDEEQEGKADLQRQLSKANAEVQLWRSKYESEGLARLEELEESKRKLDAKLQEAMETIDQLNSKTSGLEKTKSRLQGELEDMTIEVEKANALASAMEKKQKSFDRIISEWKQKVDDLALELDASQKECRNYSTEVFKLRSQYEESQEHYESVKRENKNLQDEIKDLVDQLGEGGRSVHELEKARKRLELEKEELQAALEEAEAALEQEENKVLRAQLELSQVRQEIDRRLQEKEEEFENTRKNHQRAIDSMQASLEAEAKGKAEALRMKKKLESDINELEIALDHSNKANAEAQKNIKKYQIQLKETQQALEEEQRARDEVREQYAMSERRCNAMHGELEESRQLLEQADRARRAADSELAELHENVNELSAQNSSLSMAKRKLEGEMQALHADLDEMLNEAKSSEEKAKKAMVDAARLADELRAEQEHAQQQEKMRKAMEGQIKELQVRLDEAEAAALKGGKKIIQKLEQKVRELETELDNEQRRHSEAAKNVRRSERRVKELQFQAEEDRKNQERMQDLVDKLQQKIKTYKRQIEEAEEIAALNLAKFRKVQQELEDAEERADMAENVAAKLRAKNRSSASVGRAMSPIPMGKPGRPKSKIDEE |
MYOSIN 2 HEAVY CHAIN STRIATED MUSCLE | B | 1953 | Aphonopelma | MAEDPDPTEYLYISMEQKRKDQTKPYDGKKMVWVADEKEGYLLGLIKSTQGDICTVDIEGQESRQVKKDLLQQVNPPKYEKCEDMSNLTYLNDASVLHNLKQRYYANLIYTYSGLFCVAINPYKRFPIYTNRTVQIYKGRRRTEVPPHLFAISDGAYSAMLANRENQSMLITGESGAGKTENTKKVIAYYANVGAATPKPGKEAPTKEKKATLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPMGKLAGADIETYLLEKARVISQQTLERSYHIFYQLMSGGIENLKADLLLSDDIYDYHFVSQGKIEIPGVDDAEELRLTDTAFDILGFSHEYKTDVYKITASCMHLGEMKFKQRPREEQAEADGTEEGERVAHLLGVNAADLYKNLVKPKIKVGNEMVTQGRNATQVSYSVGGLAKAMFDRTFKWLVKRLNETLDTKQKRQYFIGVLDIAGFEIFDYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYKREGIDWVFIDFGLDLAACIELIEKPMGILSILEEESMFPKATDKSFQDKLNANHLGKSPNFVKPKPPKPGQQEAHFSIAHYAGTVPYNITGWLEKNKDPVNDTVVDQFKKGSNKLVQEIFEDHPGLGAEEKGGGGKGGGGRKKGASFQTVSALYREQLNRLMASLHSTQPHFVRCIIPNELKQPGVIDSGLVMHQLTCNGVLEGIRICRKGFPNRMVYPDFKQRYTILAASAVPKGFVDAKKVTEAVLGAIQLDANDYRLGNTKVFFRAGVLGRLEEMRDDRLGKIVTWLQAWIRWYLSKKEFKKLQEQRVALLVIQRNLRKFLTLRNWLWYKLYIKVKPLLTMAKVEDELKALEEKLKKALESLEKEEKVRKDIEVQNVKLLQEKNDLFLQLESERSGAGDVEERLTKAISMKNDLEGQVQELQERLSREEDAHSNLSSVRKKLDGEISNLKKEIEDLQLVIQKTEQDKAAKDHQIRNLNDEIAHQDELINKLNREKKQMQEMGQKTGEDLQATEDKLNHMNKVKAKLEQTLDELEDSLEREKKLRGDVEKTKRKVEGDLKLAQEAVADLEKNKKELEQALQRKEKEMASLSAKLEDEQGLVAKLQKQIKELQARIEELEEELEAERQARAKAEKQRADLAREIEELSERLEEAGGATSAQVELNKRREAEMAKLRRDLEESNIQHEQTLANLRKKHNDVVAELSEQIDQLNKHKARLEKEKAQMKGELDDVRSSVDHVNKEKANAEKQAKQLEMQLTELQGKMDEAHRSLGDFDAAKKRLTVENTELTRQLEDAESQVSQLSKLKTSLQTQLEDTKRMADEESRERATAMGKFRSVEHDLDSLREQIDEEQEGKADLQRQLSKANAEVQLWRSKYESEGLARLEELEESKRKLDAKLQEAMETIDQLNSKTSGLEKTKSRLQGELEDMTIEVEKANALASAMEKKQKSFDRIISEWKQKVDDLALELDASQKECRNYSTEVFKLRSQYEESQEHYESVKRENKNLQDEIKDLVDQLGEGGRSVHELEKARKRLELEKEELQAALEEAEAALEQEENKVLRAQLELSQVRQEIDRRLQEKEEEFENTRKNHQRAIDSMQASLEAEAKGKAEALRMKKKLESDINELEIALDHSNKANAEAQKNIKKYQIQLKETQQALEEEQRARDEVREQYAMSERRCNAMHGELEESRQLLEQADRARRAADSELAELHENVNELSAQNSSLSMAKRKLEGEMQALHADLDEMLNEAKSSEEKAKKAMVDAARLADELRAEQEHAQQQEKMRKAMEGQIKELQVRLDEAEAAALKGGKKIIQKLEQKVRELETELDNEQRRHSEAAKNVRRSERRVKELQFQAEEDRKNQERMQDLVDKLQQKIKTYKRQIEEAEEIAALNLAKFRKVQQELEDAEERADMAENVAAKLRAKNRSSASVGRAMSPIPMGKPGRPKSKIDEE |
MYOSIN 2 HEAVY CHAIN STRIATED MUSCLE | G | 1953 | Aphonopelma | MAEDPDPTEYLYISMEQKRKDQTKPYDGKKMVWVADEKEGYLLGLIKSTQGDICTVDIEGQESRQVKKDLLQQVNPPKYEKCEDMSNLTYLNDASVLHNLKQRYYANLIYTYSGLFCVAINPYKRFPIYTNRTVQIYKGRRRTEVPPHLFAISDGAYSAMLANRENQSMLITGESGAGKTENTKKVIAYYANVGAATPKPGKEAPTKEKKATLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPMGKLAGADIETYLLEKARVISQQTLERSYHIFYQLMSGGIENLKADLLLSDDIYDYHFVSQGKIEIPGVDDAEELRLTDTAFDILGFSHEYKTDVYKITASCMHLGEMKFKQRPREEQAEADGTEEGERVAHLLGVNAADLYKNLVKPKIKVGNEMVTQGRNATQVSYSVGGLAKAMFDRTFKWLVKRLNETLDTKQKRQYFIGVLDIAGFEIFDYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYKREGIDWVFIDFGLDLAACIELIEKPMGILSILEEESMFPKATDKSFQDKLNANHLGKSPNFVKPKPPKPGQQEAHFSIAHYAGTVPYNITGWLEKNKDPVNDTVVDQFKKGSNKLVQEIFEDHPGLGAEEKGGGGKGGGGRKKGASFQTVSALYREQLNRLMASLHSTQPHFVRCIIPNELKQPGVIDSGLVMHQLTCNGVLEGIRICRKGFPNRMVYPDFKQRYTILAASAVPKGFVDAKKVTEAVLGAIQLDANDYRLGNTKVFFRAGVLGRLEEMRDDRLGKIVTWLQAWIRWYLSKKEFKKLQEQRVALLVIQRNLRKFLTLRNWLWYKLYIKVKPLLTMAKVEDELKALEEKLKKALESLEKEEKVRKDIEVQNVKLLQEKNDLFLQLESERSGAGDVEERLTKAISMKNDLEGQVQELQERLSREEDAHSNLSSVRKKLDGEISNLKKEIEDLQLVIQKTEQDKAAKDHQIRNLNDEIAHQDELINKLNREKKQMQEMGQKTGEDLQATEDKLNHMNKVKAKLEQTLDELEDSLEREKKLRGDVEKTKRKVEGDLKLAQEAVADLEKNKKELEQALQRKEKEMASLSAKLEDEQGLVAKLQKQIKELQARIEELEEELEAERQARAKAEKQRADLAREIEELSERLEEAGGATSAQVELNKRREAEMAKLRRDLEESNIQHEQTLANLRKKHNDVVAELSEQIDQLNKHKARLEKEKAQMKGELDDVRSSVDHVNKEKANAEKQAKQLEMQLTELQGKMDEAHRSLGDFDAAKKRLTVENTELTRQLEDAESQVSQLSKLKTSLQTQLEDTKRMADEESRERATAMGKFRSVEHDLDSLREQIDEEQEGKADLQRQLSKANAEVQLWRSKYESEGLARLEELEESKRKLDAKLQEAMETIDQLNSKTSGLEKTKSRLQGELEDMTIEVEKANALASAMEKKQKSFDRIISEWKQKVDDLALELDASQKECRNYSTEVFKLRSQYEESQEHYESVKRENKNLQDEIKDLVDQLGEGGRSVHELEKARKRLELEKEELQAALEEAEAALEQEENKVLRAQLELSQVRQEIDRRLQEKEEEFENTRKNHQRAIDSMQASLEAEAKGKAEALRMKKKLESDINELEIALDHSNKANAEAQKNIKKYQIQLKETQQALEEEQRARDEVREQYAMSERRCNAMHGELEESRQLLEQADRARRAADSELAELHENVNELSAQNSSLSMAKRKLEGEMQALHADLDEMLNEAKSSEEKAKKAMVDAARLADELRAEQEHAQQQEKMRKAMEGQIKELQVRLDEAEAAALKGGKKIIQKLEQKVRELETELDNEQRRHSEAAKNVRRSERRVKELQFQAEEDRKNQERMQDLVDKLQQKIKTYKRQIEEAEEIAALNLAKFRKVQQELEDAEERADMAENVAAKLRAKNRSSASVGRAMSPIPMGKPGRPKSKIDEE |
MYOSIN 2 HEAVY CHAIN STRIATED MUSCLE | H | 1953 | Aphonopelma | MAEDPDPTEYLYISMEQKRKDQTKPYDGKKMVWVADEKEGYLLGLIKSTQGDICTVDIEGQESRQVKKDLLQQVNPPKYEKCEDMSNLTYLNDASVLHNLKQRYYANLIYTYSGLFCVAINPYKRFPIYTNRTVQIYKGRRRTEVPPHLFAISDGAYSAMLANRENQSMLITGESGAGKTENTKKVIAYYANVGAATPKPGKEAPTKEKKATLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPMGKLAGADIETYLLEKARVISQQTLERSYHIFYQLMSGGIENLKADLLLSDDIYDYHFVSQGKIEIPGVDDAEELRLTDTAFDILGFSHEYKTDVYKITASCMHLGEMKFKQRPREEQAEADGTEEGERVAHLLGVNAADLYKNLVKPKIKVGNEMVTQGRNATQVSYSVGGLAKAMFDRTFKWLVKRLNETLDTKQKRQYFIGVLDIAGFEIFDYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYKREGIDWVFIDFGLDLAACIELIEKPMGILSILEEESMFPKATDKSFQDKLNANHLGKSPNFVKPKPPKPGQQEAHFSIAHYAGTVPYNITGWLEKNKDPVNDTVVDQFKKGSNKLVQEIFEDHPGLGAEEKGGGGKGGGGRKKGASFQTVSALYREQLNRLMASLHSTQPHFVRCIIPNELKQPGVIDSGLVMHQLTCNGVLEGIRICRKGFPNRMVYPDFKQRYTILAASAVPKGFVDAKKVTEAVLGAIQLDANDYRLGNTKVFFRAGVLGRLEEMRDDRLGKIVTWLQAWIRWYLSKKEFKKLQEQRVALLVIQRNLRKFLTLRNWLWYKLYIKVKPLLTMAKVEDELKALEEKLKKALESLEKEEKVRKDIEVQNVKLLQEKNDLFLQLESERSGAGDVEERLTKAISMKNDLEGQVQELQERLSREEDAHSNLSSVRKKLDGEISNLKKEIEDLQLVIQKTEQDKAAKDHQIRNLNDEIAHQDELINKLNREKKQMQEMGQKTGEDLQATEDKLNHMNKVKAKLEQTLDELEDSLEREKKLRGDVEKTKRKVEGDLKLAQEAVADLEKNKKELEQALQRKEKEMASLSAKLEDEQGLVAKLQKQIKELQARIEELEEELEAERQARAKAEKQRADLAREIEELSERLEEAGGATSAQVELNKRREAEMAKLRRDLEESNIQHEQTLANLRKKHNDVVAELSEQIDQLNKHKARLEKEKAQMKGELDDVRSSVDHVNKEKANAEKQAKQLEMQLTELQGKMDEAHRSLGDFDAAKKRLTVENTELTRQLEDAESQVSQLSKLKTSLQTQLEDTKRMADEESRERATAMGKFRSVEHDLDSLREQIDEEQEGKADLQRQLSKANAEVQLWRSKYESEGLARLEELEESKRKLDAKLQEAMETIDQLNSKTSGLEKTKSRLQGELEDMTIEVEKANALASAMEKKQKSFDRIISEWKQKVDDLALELDASQKECRNYSTEVFKLRSQYEESQEHYESVKRENKNLQDEIKDLVDQLGEGGRSVHELEKARKRLELEKEELQAALEEAEAALEQEENKVLRAQLELSQVRQEIDRRLQEKEEEFENTRKNHQRAIDSMQASLEAEAKGKAEALRMKKKLESDINELEIALDHSNKANAEAQKNIKKYQIQLKETQQALEEEQRARDEVREQYAMSERRCNAMHGELEESRQLLEQADRARRAADSELAELHENVNELSAQNSSLSMAKRKLEGEMQALHADLDEMLNEAKSSEEKAKKAMVDAARLADELRAEQEHAQQQEKMRKAMEGQIKELQVRLDEAEAAALKGGKKIIQKLEQKVRELETELDNEQRRHSEAAKNVRRSERRVKELQFQAEEDRKNQERMQDLVDKLQQKIKTYKRQIEEAEEIAALNLAKFRKVQQELEDAEERADMAENVAAKLRAKNRSSASVGRAMSPIPMGKPGRPKSKIDEE |
MYOSIN 2 ESSENTIAL LIGHT CHAIN STRIATED MUSCLE | C | 156 | Aphonopelma | MADLKAAEVEKAREHFEIYDWEGEGKIDARDLGDLLRSLDCKPTLAMVKKNGGSDKRGEKKLTLEEFLPIFSQIKKEKEVGTLEDFMEGLKVYDKAENGTMLAAELAHVLLSLGERLTDIECEEIMRVCDEDDDGFLKYEPFVKTIIAGPFPDEGK |
MYOSIN 2 ESSENTIAL LIGHT CHAIN STRIATED MUSCLE | D | 156 | Aphonopelma | MADLKAAEVEKAREHFEIYDWEGEGKIDARDLGDLLRSLDCKPTLAMVKKNGGSDKRGEKKLTLEEFLPIFSQIKKEKEVGTLEDFMEGLKVYDKAENGTMLAAELAHVLLSLGERLTDIECEEIMRVCDEDDDGFLKYEPFVKTIIAGPFPDEGK |
MYOSIN 2 ESSENTIAL LIGHT CHAIN STRIATED MUSCLE | I | 156 | Aphonopelma | MADLKAAEVEKAREHFEIYDWEGEGKIDARDLGDLLRSLDCKPTLAMVKKNGGSDKRGEKKLTLEEFLPIFSQIKKEKEVGTLEDFMEGLKVYDKAENGTMLAAELAHVLLSLGERLTDIECEEIMRVCDEDDDGFLKYEPFVKTIIAGPFPDEGK |
MYOSIN 2 ESSENTIAL LIGHT CHAIN STRIATED MUSCLE | J | 156 | Aphonopelma | MADLKAAEVEKAREHFEIYDWEGEGKIDARDLGDLLRSLDCKPTLAMVKKNGGSDKRGEKKLTLEEFLPIFSQIKKEKEVGTLEDFMEGLKVYDKAENGTMLAAELAHVLLSLGERLTDIECEEIMRVCDEDDDGFLKYEPFVKTIIAGPFPDEGK |
MYOSIN 2 REGULATORY LIGHT CHAIN STRIATED MUSCLE | E | 196 | Aphonopelma | MGDEEKKEKKKKSKKKSEEEGGDAAPAPPPPKPPSQKRRAQRSGSNVFAMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEAPGPINFTMFLTIFGDRIAGTDEEDVIVNAFNLFDEGEGKCKEETLKRSLTTWGEKFSQDEVEEALSEAPIDGNGLIDIKKFAQILTKGAEEEGA |
MYOSIN 2 REGULATORY LIGHT CHAIN STRIATED MUSCLE | F | 196 | Aphonopelma | MGDEEKKEKKKKSKKKSEEEGGDAAPAPPPPKPPSQKRRAQRSGSNVFAMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEAPGPINFTMFLTIFGDRIAGTDEEDVIVNAFNLFDEGEGKCKEETLKRSLTTWGEKFSQDEVEEALSEAPIDGNGLIDIKKFAQILTKGAEEEGA |
MYOSIN 2 REGULATORY LIGHT CHAIN STRIATED MUSCLE | K | 196 | Aphonopelma | MGDEEKKEKKKKSKKKSEEEGGDAAPAPPPPKPPSQKRRAQRSGSNVFAMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEAPGPINFTMFLTIFGDRIAGTDEEDVIVNAFNLFDEGEGKCKEETLKRSLTTWGEKFSQDEVEEALSEAPIDGNGLIDIKKFAQILTKGAEEEGA |
MYOSIN 2 REGULATORY LIGHT CHAIN STRIATED MUSCLE | L | 196 | Aphonopelma | MGDEEKKEKKKKSKKKSEEEGGDAAPAPPPPKPPSQKRRAQRSGSNVFAMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEAPGPINFTMFLTIFGDRIAGTDEEDVIVNAFNLFDEGEGKCKEETLKRSLTTWGEKFSQDEVEEALSEAPIDGNGLIDIKKFAQILTKGAEEEGA |
Method: ELECTRON MICROSCOPY
Deposited Date: 2015-09-01 Deposition Author(s): Alamo, L. , Bilbao, A. , Gillilan, R.E. , Hu, S. , Padron, R. , Pinto, A. , Qi, D. , Wriggers, W. , Zhu, J.