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FASTA Sequence PDB Format mmCIF Format
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3JB6

In situ structures of the segmented genome and rna polymerase complex inside a dsrna virus

PDB DOI: 10.2210/pdb3jb6/pdb

Classification: TRANSFERASE/VIRAL PROTEIN
Organism(s): Bombyx Mori Cypovirus 1

Deposited: 2015-08-02
Deposition Author(s): Chang, W. , Ding, K. , Sun, J.C. , Yu, X.K. , Zhang, X. , Zhou, Z.H.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.3 Å

3jb6
Literature

In situ structures of the segmented genome and rna polymerase complex inside a dsrna virus

Chang, W. , Ding, K. , Sun, J.C. , Yu, X.K. , Zhang, X. , Zhou, Z.H.

Primary Citation of Related Structures: 3JB6


Proteins
Molecule Chains Sequence Length Organism Sequence
RNA-dependent RNA polymerase A 1225 Bombyx Mori Cypovirus 1 MLPNTKLHNTIFSETRKFTRESFKEIEHLTARLANDRVARHDFLFNTSIVLISDYSGEDSNGNQLQATITIPNEIINPKEYDPSDYPLAEDESFFKQGHKYDYLVTFRAGSLTNTYEPKTKMYKLHAALDKLMHVKQRKSRFADLWRELCAVIASLDVWYQTTNYPLRTYVKLLFHKGDEFPFYESPSQDRIIFNDKSVASILPTFVYTCCQVGTAIMSGILTHVESIVAMNHFLHCAKDSYIDEKLKIKGIGRSWYQEALHNVCQATVPVWSQFNEVIGHRTKSTSEPHFVSSTFISLRAKRAELLYPEFNAYINRAIQLSKTQNDVANYYAACRAMTNDGTFLATLTELSLDAAVFPRIEQHLVTRPAVLMSNTRHESLKQKYTNGVGSIAQSYLSSFTDEIAKRVNGRHHDEAWLNFLTTSSPGRKLTEIEKLEVGGDVAAWSNSRIVMQAVFAREYRTPERIFKSLKAPIKLVERQQSDRRQRAISGLDNDRLFLSFMPYTIGKQIYELNDNAAQGKQAGNAFDIGEMLYWTSQRNVLLSSIDVAGMDASVTTNTKDIYNTFVLDVASKCTVPRFGPYYAKNMEVFEAGNRQSQVRYVNAAWQACALEAANSQTSTSYESEIFGQVKNAEGTYPSGRADTSTHHTVLLQGLVRGNELKRASDGKNSCLATIKILGDDIMEIFQGSESDTYDHAVSNASILNESGFATTAELSQNSIVLLQQLVVNGTFWGFADRISLWTREDTKDIGRLNLAMMELNALIDDLVFRVRRPEGLKMLGFFCGAICLRRFTLSVDNKLYDSTYNNLSKYMTLTKYDKNPDSDSTLMSLILPLAWLFMPRGGEYPAYPFERRDGTFTEDESMFTARGAYKRRLLYDVSNIGEMIQQNSMALDDDLLHEYGFTGALLLIDLNILDLIDEVKKEDISPVKVSELATSLEQLGKLGEREKSRRAASDLKIRGHALSNDIVYGYGLQEKIQKSAMATKETTVQSKRVSSRLHDVIVAKTRDYKISTIPADALHLHEFEVEDVTVDLLPHAKHTSYSSLAYNMSFGSDGWFAFALLGGLDRSANLLRLDVASIRGNYHKFSYDDPVFKQGYKIYKSDATLLNDFFTAISAGPKEQGILLRAFAYYSLYGNVEYHYVLSPRQLFFLSDNPVSAERLVRIPPKYYVSTQCRALYNIFSYLHILRSIANNRGKRLKMVLHPGLIAYVRGTSQGAILPEADNV
Viral structural protein 4 B 561 Bombyx Mori Cypovirus 1 MFAIDPLKHSKLYEEYGLYLRPHQINQEIKPTTIKKKELAPTIRSIKYASLIHSMLAKHAARHNGTLINPRMYADMITLGNTKVTVTKGTPKAQIDTLKMNGLTVVSKSRRNNKKKPVSDTTATIDENTDDIVTYKALTEMSTLIESFRLPSGLALIIFDDEKYQSLIPNYINQLIAYTQPHIIPTWQGIADFSDTYLRSYFKRPFELTASNLAAPQKYNLSPMTRSIFNNTGREDAVIRKLYGYGEYVFIRYEGCLITWTGIYGEVTMMVNLSKRDLGLDVGDDYLKEYKKLLFYGVITDAIPSGISARSTIMKISPHKMMNPSGGALAVLSKFLEAVVSTNVINATLVVYAEKGAGKTSFLSTYAEQLSLASGQVVGHLSSDAYGRWLAKNKDVEEPSFAYDYVLSLDTDDNESYYEQKASELLISHGISEVAQYELLSVRKKIKMMDEMNEVLIAQLENADTHSERNFYYMVSTGKTTPRTLIVEGHFNAQDATIARTDTTVLLRTINDTTQAMRDRQRGGVVQLFLRDTYYRLLPALHTTVYPFEMLESIRRWKWVH
VP1 CSP C 24 Bombyx Mori Cypovirus 1 PTVVQSRTDVFNEQFANEALHPMT
VP1 CSP D 24 Bombyx Mori Cypovirus 1 PTVVQSRTDVFNEQFANEALHPMT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2015-08-02
Deposition Author(s): Chang, W. , Ding, K. , Sun, J.C. , Yu, X.K. , Zhang, X. , Zhou, Z.H.