3JB4
Structure of ljungan virus: insight into picornavirus packaging
PDB DOI: 10.2210/pdb3jb4/pdb
Classification: VIRUS Organism(s): Herpes Simplex Virus (Type 1 / Strain F)
Deposited: 2015-07-21 Deposition Author(s): Ekstrom, J.-O. , Fry, E.E. , Knowles, N.J. , Kotecha, A. , Lindberg, M. , Panjwani, A. , Porta, C. , Rao, Z.H. , Ren, J.S. , Siebert, A. , Stuart, D.I. , Tuthill, T.J. , Wang, X.X. , Wenham, H. , Zhu, L.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.8 Å
Structure of ljungan virus: insight into picornavirus packaging
Ekstrom, J.-O. , Fry, E.E. , Knowles, N.J. , Kotecha, A. , Lindberg, M. , Panjwani, A. , Porta, C. , Rao, Z.H. , Ren, J.S. , Siebert, A. , Stuart, D.I. , Tuthill, T.J. , Wang, X.X. , Wenham, H. , Zhu, L.
Primary Citation of Related Structures: 3JB4
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| VP1 | A | 297 | Herpes Simplex Virus (Type 1 / Strain F) | GLHSWGSEMDLVDSLDNPDEIQDNEEIQTQNVEAAQGEELATEVGLRATENDGSLSEQLNMSQPMFLNFKKHKVNIYAATHTKVDHIFGRAWAVGVFNTETAAIQKFDLHFPTSTHGALSRFFCHWTGELNIHILNVSTTNAFLKVAHTWFGTDSGIARTATLESNGTMIIPPNEQMTLCVPYYSEVPLRCVKGSDRNSAGLGSLFTQAVGRTISNRVQIFVSFRCPNFFFPLPAPREATSASILERVDEANAEELEAVLEARTPDAPLRLKFNPEDPLKQLREAAKAYFNIMHSDE |
| VP0 | B | 259 | Herpes Simplex Virus (Type 1 / Strain F) | MAASKMNPVGNLLSTVSSTVGSLLQNPSVEEKEMDSDRVAASTTTNAGNLVQASVAPTMPVKPDFKNTDDFLSMSYRSTTAPTNPTKMVHLAHGTWTTNQHRQALVASITLLQAFWPNQDFPAWGQSRYFAAVRCGFHIQVQLNVNIGSAGCLIAAYMPKTAHDHMNTYTFGSYTNLPHVLMNAATTSQADLYIPYVFNHNYARTDSDDLGGIYIWVWSALTVPSGSPTTVDVTIFGSLLDLDFQCPRPPGADTVIYTQ |
| VP3 | C | 244 | Herpes Simplex Virus (Type 1 / Strain F) | GKRTVRKTKTSKFKWVRNKIDIAEGPGAMNIANVLSTTGGQTIALVGERAFYDPRTAGAAVRCKDLMEIARMPSVFLGESTEPDGRRGYFTWSHTISPVNWVFDDHIYLENMPNLRLFSSCYNYWRGSFVIKLTVYASTFNKGRLRMAFFPNREGAYTQDDAQNAIFVVCDIGLNNTFEMTIPYTWGNWMRPTRGNSLGHLRIDVLNRLTYNSSSPNAVNCILQIKMGDDAMFMVPTTSNLVMQ |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2015-07-21 Deposition Author(s): Ekstrom, J.-O. , Fry, E.E. , Knowles, N.J. , Kotecha, A. , Lindberg, M. , Panjwani, A. , Porta, C. , Rao, Z.H. , Ren, J.S. , Siebert, A. , Stuart, D.I. , Tuthill, T.J. , Wang, X.X. , Wenham, H. , Zhu, L.