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FASTA Sequence PDB Format mmCIF Format
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3J8Z

Cryo-em reconstruction of quasi-hpv16 complex with h16.1a fab

PDB DOI: 10.2210/pdb3j8z/pdb

Classification: VIRUS/IMMUNE SYSTEM
Organism(s): Human Papillomavirus Type 16 , Mus Musculus

Deposited: 2014-11-20
Deposition Author(s): Guan, J. , Hafenstein, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 14.0 Å

Literature

Cryo-em reconstruction of quasi-hpv16 complex with h16.1a fab

Guan, J. , Hafenstein, S.

Primary Citation of Related Structures: 3J8Z


Proteins
Molecule Chains Sequence Length Organism Sequence
L1 A 455 Human Papillomavirus Type 16 , Mus Musculus AVVSTDEYVARTNIYYHAGTSRLLAVGHPYFPIKKPNNNKILVPKVSGLQYRVFRIHLPDPNKFGFPDTSFYNPDTQRLVWACVGVEVGRGQPLGVGISGHPLLNKLDDTENASAYAANAGVDNRECISMDYKQTQLCLIGCKPPIGEHWGKGSPCTQVAVQPGDCPPLELINTVIQDGDMVDTGFGAMDFTTLQANKSEVPLDICTSICKYPDYIKMVSEPYGDSLFFYLRREQMFVRHLFNRAGTVGENVPDDLYIKGSGSTANLASSNYFPTPSGSMVTSDAQIFNKPYWLQRAQGHNNGICWGNQLFVTVVDTTRSTNMSLCAAISTSETTYKNTNFKEYLRHGEEYDLQFIFQLCKITLTADVMTYIHSMNSTILEDWNFGLQPPPGGTLEDTYRFVTSQAIACQKHTPPAPKEDPLKKYTFWEVNLKEKFSADLDQFPLGRKFLLQLGL
L1 B 455 Human Papillomavirus Type 16 , Mus Musculus AVVSTDEYVARTNIYYHAGTSRLLAVGHPYFPIKKPNNNKILVPKVSGLQYRVFRIHLPDPNKFGFPDTSFYNPDTQRLVWACVGVEVGRGQPLGVGISGHPLLNKLDDTENASAYAANAGVDNRECISMDYKQTQLCLIGCKPPIGEHWGKGSPCTQVAVQPGDCPPLELINTVIQDGDMVDTGFGAMDFTTLQANKSEVPLDICTSICKYPDYIKMVSEPYGDSLFFYLRREQMFVRHLFNRAGTVGENVPDDLYIKGSGSTANLASSNYFPTPSGSMVTSDAQIFNKPYWLQRAQGHNNGICWGNQLFVTVVDTTRSTNMSLCAAISTSETTYKNTNFKEYLRHGEEYDLQFIFQLCKITLTADVMTYIHSMNSTILEDWNFGLQPPPGGTLEDTYRFVTSQAIACQKHTPPAPKEDPLKKYTFWEVNLKEKFSADLDQFPLGRKFLLQLGL
L1 C 455 Human Papillomavirus Type 16 , Mus Musculus AVVSTDEYVARTNIYYHAGTSRLLAVGHPYFPIKKPNNNKILVPKVSGLQYRVFRIHLPDPNKFGFPDTSFYNPDTQRLVWACVGVEVGRGQPLGVGISGHPLLNKLDDTENASAYAANAGVDNRECISMDYKQTQLCLIGCKPPIGEHWGKGSPCTQVAVQPGDCPPLELINTVIQDGDMVDTGFGAMDFTTLQANKSEVPLDICTSICKYPDYIKMVSEPYGDSLFFYLRREQMFVRHLFNRAGTVGENVPDDLYIKGSGSTANLASSNYFPTPSGSMVTSDAQIFNKPYWLQRAQGHNNGICWGNQLFVTVVDTTRSTNMSLCAAISTSETTYKNTNFKEYLRHGEEYDLQFIFQLCKITLTADVMTYIHSMNSTILEDWNFGLQPPPGGTLEDTYRFVTSQAIACQKHTPPAPKEDPLKKYTFWEVNLKEKFSADLDQFPLGRKFLLQLGL
L1 D 455 Human Papillomavirus Type 16 , Mus Musculus AVVSTDEYVARTNIYYHAGTSRLLAVGHPYFPIKKPNNNKILVPKVSGLQYRVFRIHLPDPNKFGFPDTSFYNPDTQRLVWACVGVEVGRGQPLGVGISGHPLLNKLDDTENASAYAANAGVDNRECISMDYKQTQLCLIGCKPPIGEHWGKGSPCTQVAVQPGDCPPLELINTVIQDGDMVDTGFGAMDFTTLQANKSEVPLDICTSICKYPDYIKMVSEPYGDSLFFYLRREQMFVRHLFNRAGTVGENVPDDLYIKGSGSTANLASSNYFPTPSGSMVTSDAQIFNKPYWLQRAQGHNNGICWGNQLFVTVVDTTRSTNMSLCAAISTSETTYKNTNFKEYLRHGEEYDLQFIFQLCKITLTADVMTYIHSMNSTILEDWNFGLQPPPGGTLEDTYRFVTSQAIACQKHTPPAPKEDPLKKYTFWEVNLKEKFSADLDQFPLGRKFLLQLGL
L1 E 455 Human Papillomavirus Type 16 , Mus Musculus AVVSTDEYVARTNIYYHAGTSRLLAVGHPYFPIKKPNNNKILVPKVSGLQYRVFRIHLPDPNKFGFPDTSFYNPDTQRLVWACVGVEVGRGQPLGVGISGHPLLNKLDDTENASAYAANAGVDNRECISMDYKQTQLCLIGCKPPIGEHWGKGSPCTQVAVQPGDCPPLELINTVIQDGDMVDTGFGAMDFTTLQANKSEVPLDICTSICKYPDYIKMVSEPYGDSLFFYLRREQMFVRHLFNRAGTVGENVPDDLYIKGSGSTANLASSNYFPTPSGSMVTSDAQIFNKPYWLQRAQGHNNGICWGNQLFVTVVDTTRSTNMSLCAAISTSETTYKNTNFKEYLRHGEEYDLQFIFQLCKITLTADVMTYIHSMNSTILEDWNFGLQPPPGGTLEDTYRFVTSQAIACQKHTPPAPKEDPLKKYTFWEVNLKEKFSADLDQFPLGRKFLLQLGL
H16.1A light chain L 115 Human Papillomavirus Type 16 , Mus Musculus DIVMTQSPSSLAMSAGQKVTMSCKSSQSLFDSRNQKNYLAWYQQKPGQSPTLLVYFASTRESGVPDRFIGSGSGTDFTLTISSVQAEDLADYFCQQHYSTPYTFGGGTKLEIKRA
H16.1A light chain J 115 Human Papillomavirus Type 16 , Mus Musculus DIVMTQSPSSLAMSAGQKVTMSCKSSQSLFDSRNQKNYLAWYQQKPGQSPTLLVYFASTRESGVPDRFIGSGSGTDFTLTISSVQAEDLADYFCQQHYSTPYTFGGGTKLEIKRA
H16.1A light chain K 115 Human Papillomavirus Type 16 , Mus Musculus DIVMTQSPSSLAMSAGQKVTMSCKSSQSLFDSRNQKNYLAWYQQKPGQSPTLLVYFASTRESGVPDRFIGSGSGTDFTLTISSVQAEDLADYFCQQHYSTPYTFGGGTKLEIKRA
H16.1A light chain M 115 Human Papillomavirus Type 16 , Mus Musculus DIVMTQSPSSLAMSAGQKVTMSCKSSQSLFDSRNQKNYLAWYQQKPGQSPTLLVYFASTRESGVPDRFIGSGSGTDFTLTISSVQAEDLADYFCQQHYSTPYTFGGGTKLEIKRA
H16.1A heavy chain H 114 Human Papillomavirus Type 16 , Mus Musculus SGAELARPGASVKLSCKASGYTFTSYWMQWVKQRPGQGLEWIGAIYPGDGYTRYTQKFKGMATLTADKSSSTAYMQLTSLASEDSAVYYCARTYAGYYVGYFDYWGQGTTLTVS
H16.1A heavy chain F 114 Human Papillomavirus Type 16 , Mus Musculus SGAELARPGASVKLSCKASGYTFTSYWMQWVKQRPGQGLEWIGAIYPGDGYTRYTQKFKGMATLTADKSSSTAYMQLTSLASEDSAVYYCARTYAGYYVGYFDYWGQGTTLTVS
H16.1A heavy chain G 114 Human Papillomavirus Type 16 , Mus Musculus SGAELARPGASVKLSCKASGYTFTSYWMQWVKQRPGQGLEWIGAIYPGDGYTRYTQKFKGMATLTADKSSSTAYMQLTSLASEDSAVYYCARTYAGYYVGYFDYWGQGTTLTVS
H16.1A heavy chain I 114 Human Papillomavirus Type 16 , Mus Musculus SGAELARPGASVKLSCKASGYTFTSYWMQWVKQRPGQGLEWIGAIYPGDGYTRYTQKFKGMATLTADKSSSTAYMQLTSLASEDSAVYYCARTYAGYYVGYFDYWGQGTTLTVS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2014-11-20
Deposition Author(s): Guan, J. , Hafenstein, S.