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FASTA Sequence PDB Format mmCIF Format
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3J8V

Cryo-em reconstruction of quasi-hpv16 complex with h16.14j fab

PDB DOI: 10.2210/pdb3j8v/pdb

Classification: VIRUS/IMMUNE SYSTEM
Organism(s): Basidiomycete Pm1 , Enterobacter Aerogenes

Deposited: 2014-11-19
Deposition Author(s): Guan, J. , Hafenstein, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 13.9 Å

3j8v
Literature

Cryo-em reconstruction of quasi-hpv16 complex with h16.14j fab

Guan, J. , Hafenstein, S.

Primary Citation of Related Structures: 3J8V


Proteins
Molecule Chains Sequence Length Organism Sequence
L1 A 455 Basidiomycete Pm1 , Enterobacter Aerogenes AVVSTDEYVARTNIYYHAGTSRLLAVGHPYFPIKKPNNNKILVPKVSGLQYRVFRIHLPDPNKFGFPDTSFYNPDTQRLVWACVGVEVGRGQPLGVGISGHPLLNKLDDTENASAYAANAGVDNRECISMDYKQTQLCLIGCKPPIGEHWGKGSPCTQVAVQPGDCPPLELINTVIQDGDMVDTGFGAMDFTTLQANKSEVPLDICTSICKYPDYIKMVSEPYGDSLFFYLRREQMFVRHLFNRAGTVGENVPDDLYIKGSGSTANLASSNYFPTPSGSMVTSDAQIFNKPYWLQRAQGHNNGICWGNQLFVTVVDTTRSTNMSLCAAISTSETTYKNTNFKEYLRHGEEYDLQFIFQLCKITLTADVMTYIHSMNSTILEDWNFGLQPPPGGTLEDTYRFVTSQAIACQKHTPPAPKEDPLKKYTFWEVNLKEKFSADLDQFPLGRKFLLQLGL
L1 B 455 Basidiomycete Pm1 , Enterobacter Aerogenes AVVSTDEYVARTNIYYHAGTSRLLAVGHPYFPIKKPNNNKILVPKVSGLQYRVFRIHLPDPNKFGFPDTSFYNPDTQRLVWACVGVEVGRGQPLGVGISGHPLLNKLDDTENASAYAANAGVDNRECISMDYKQTQLCLIGCKPPIGEHWGKGSPCTQVAVQPGDCPPLELINTVIQDGDMVDTGFGAMDFTTLQANKSEVPLDICTSICKYPDYIKMVSEPYGDSLFFYLRREQMFVRHLFNRAGTVGENVPDDLYIKGSGSTANLASSNYFPTPSGSMVTSDAQIFNKPYWLQRAQGHNNGICWGNQLFVTVVDTTRSTNMSLCAAISTSETTYKNTNFKEYLRHGEEYDLQFIFQLCKITLTADVMTYIHSMNSTILEDWNFGLQPPPGGTLEDTYRFVTSQAIACQKHTPPAPKEDPLKKYTFWEVNLKEKFSADLDQFPLGRKFLLQLGL
L1 C 455 Basidiomycete Pm1 , Enterobacter Aerogenes AVVSTDEYVARTNIYYHAGTSRLLAVGHPYFPIKKPNNNKILVPKVSGLQYRVFRIHLPDPNKFGFPDTSFYNPDTQRLVWACVGVEVGRGQPLGVGISGHPLLNKLDDTENASAYAANAGVDNRECISMDYKQTQLCLIGCKPPIGEHWGKGSPCTQVAVQPGDCPPLELINTVIQDGDMVDTGFGAMDFTTLQANKSEVPLDICTSICKYPDYIKMVSEPYGDSLFFYLRREQMFVRHLFNRAGTVGENVPDDLYIKGSGSTANLASSNYFPTPSGSMVTSDAQIFNKPYWLQRAQGHNNGICWGNQLFVTVVDTTRSTNMSLCAAISTSETTYKNTNFKEYLRHGEEYDLQFIFQLCKITLTADVMTYIHSMNSTILEDWNFGLQPPPGGTLEDTYRFVTSQAIACQKHTPPAPKEDPLKKYTFWEVNLKEKFSADLDQFPLGRKFLLQLGL
L1 D 455 Basidiomycete Pm1 , Enterobacter Aerogenes AVVSTDEYVARTNIYYHAGTSRLLAVGHPYFPIKKPNNNKILVPKVSGLQYRVFRIHLPDPNKFGFPDTSFYNPDTQRLVWACVGVEVGRGQPLGVGISGHPLLNKLDDTENASAYAANAGVDNRECISMDYKQTQLCLIGCKPPIGEHWGKGSPCTQVAVQPGDCPPLELINTVIQDGDMVDTGFGAMDFTTLQANKSEVPLDICTSICKYPDYIKMVSEPYGDSLFFYLRREQMFVRHLFNRAGTVGENVPDDLYIKGSGSTANLASSNYFPTPSGSMVTSDAQIFNKPYWLQRAQGHNNGICWGNQLFVTVVDTTRSTNMSLCAAISTSETTYKNTNFKEYLRHGEEYDLQFIFQLCKITLTADVMTYIHSMNSTILEDWNFGLQPPPGGTLEDTYRFVTSQAIACQKHTPPAPKEDPLKKYTFWEVNLKEKFSADLDQFPLGRKFLLQLGL
L1 E 455 Basidiomycete Pm1 , Enterobacter Aerogenes AVVSTDEYVARTNIYYHAGTSRLLAVGHPYFPIKKPNNNKILVPKVSGLQYRVFRIHLPDPNKFGFPDTSFYNPDTQRLVWACVGVEVGRGQPLGVGISGHPLLNKLDDTENASAYAANAGVDNRECISMDYKQTQLCLIGCKPPIGEHWGKGSPCTQVAVQPGDCPPLELINTVIQDGDMVDTGFGAMDFTTLQANKSEVPLDICTSICKYPDYIKMVSEPYGDSLFFYLRREQMFVRHLFNRAGTVGENVPDDLYIKGSGSTANLASSNYFPTPSGSMVTSDAQIFNKPYWLQRAQGHNNGICWGNQLFVTVVDTTRSTNMSLCAAISTSETTYKNTNFKEYLRHGEEYDLQFIFQLCKITLTADVMTYIHSMNSTILEDWNFGLQPPPGGTLEDTYRFVTSQAIACQKHTPPAPKEDPLKKYTFWEVNLKEKFSADLDQFPLGRKFLLQLGL
H16.14J light chain L 109 Basidiomycete Pm1 , Enterobacter Aerogenes DIVMTQSPSYLSVSLGGRVTITCKASDHINNWLAWYQQKPGNAPRLLISGATSLETGVPSRFSGSGSGKDFTLSITSLQTEDVATYHCQQYWSTPLTFGAGTKLELKRA
H16.14J light chain J 109 Basidiomycete Pm1 , Enterobacter Aerogenes DIVMTQSPSYLSVSLGGRVTITCKASDHINNWLAWYQQKPGNAPRLLISGATSLETGVPSRFSGSGSGKDFTLSITSLQTEDVATYHCQQYWSTPLTFGAGTKLELKRA
H16.14J light chain K 109 Basidiomycete Pm1 , Enterobacter Aerogenes DIVMTQSPSYLSVSLGGRVTITCKASDHINNWLAWYQQKPGNAPRLLISGATSLETGVPSRFSGSGSGKDFTLSITSLQTEDVATYHCQQYWSTPLTFGAGTKLELKRA
H16.14J light chain M 109 Basidiomycete Pm1 , Enterobacter Aerogenes DIVMTQSPSYLSVSLGGRVTITCKASDHINNWLAWYQQKPGNAPRLLISGATSLETGVPSRFSGSGSGKDFTLSITSLQTEDVATYHCQQYWSTPLTFGAGTKLELKRA
H16.14J heavy chain H 119 Basidiomycete Pm1 , Enterobacter Aerogenes QLQQSGAELVRPGSSVKISCKASGYAFSSYWMNWVKQRPGQGLEWIGQIYPGDGATNYNGKFKGKATLTADKSSSTAFMQISSLTSEDSAVYFCARPYRYDGGVYAMDYWGQGTSVTVS
H16.14J heavy chain F 119 Basidiomycete Pm1 , Enterobacter Aerogenes QLQQSGAELVRPGSSVKISCKASGYAFSSYWMNWVKQRPGQGLEWIGQIYPGDGATNYNGKFKGKATLTADKSSSTAFMQISSLTSEDSAVYFCARPYRYDGGVYAMDYWGQGTSVTVS
H16.14J heavy chain G 119 Basidiomycete Pm1 , Enterobacter Aerogenes QLQQSGAELVRPGSSVKISCKASGYAFSSYWMNWVKQRPGQGLEWIGQIYPGDGATNYNGKFKGKATLTADKSSSTAFMQISSLTSEDSAVYFCARPYRYDGGVYAMDYWGQGTSVTVS
H16.14J heavy chain I 119 Basidiomycete Pm1 , Enterobacter Aerogenes QLQQSGAELVRPGSSVKISCKASGYAFSSYWMNWVKQRPGQGLEWIGQIYPGDGATNYNGKFKGKATLTADKSSSTAFMQISSLTSEDSAVYFCARPYRYDGGVYAMDYWGQGTSVTVS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2014-11-19
Deposition Author(s): Guan, J. , Hafenstein, S.