3J4U
A new topology of the hk97-like fold revealed in bordetella bacteriophage: non-covalent chainmail secured by jellyrolls
PDB DOI: 10.2210/pdb3j4u/pdb
Classification: VIRUS Organism(s): Bordetella Phage Bpp-1
Deposited: 2013-10-09 Deposition Author(s): Czornyj, E. , Guo, H. , Hodes, A. , Hui, W.H. , Jin, L. , Miller, J.F. , Nieh, A.W. , Zhang, X. , Zhou, Z.H.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.5 Å
A new topology of the hk97-like fold revealed in bordetella bacteriophage: non-covalent chainmail secured by jellyrolls
Czornyj, E. , Guo, H. , Hodes, A. , Hui, W.H. , Jin, L. , Miller, J.F. , Nieh, A.W. , Zhang, X. , Zhou, Z.H.
Primary Citation of Related Structures: 3J4U
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| major capsid protein | A | 331 | Bordetella Phage Bpp-1 | MPTLSTTNPTLADVAARMTPDGKIDPQIVEMLNETNEILDDMTVIEANGFTEHKTTVRSGLPTGTWRKLNYGVQPEKSRTVQVKDSMGMLETYAEVDKALADLNGNSAAWRLSEDRAFIEGMNQTQATTLFYGDSSIDAEKFMGLTPRFNSLSAENGQNIIDAGGTGSDNASIWLTVWGPNTLHTIYPKGSQAGLQSRDLGEDTLIDAAGGRYQGYRTHYKWDIGLTLRDWRYVVRIANVDVSELTKNASAGADLIDLMTQAVELIPNVGMGRPAFYMPRKIRSFLRRQITNKVAASTLTMEEIAGKKVVAFDGIPCRRTDALLLTEARVV |
| major capsid protein | B | 331 | Bordetella Phage Bpp-1 | MPTLSTTNPTLADVAARMTPDGKIDPQIVEMLNETNEILDDMTVIEANGFTEHKTTVRSGLPTGTWRKLNYGVQPEKSRTVQVKDSMGMLETYAEVDKALADLNGNSAAWRLSEDRAFIEGMNQTQATTLFYGDSSIDAEKFMGLTPRFNSLSAENGQNIIDAGGTGSDNASIWLTVWGPNTLHTIYPKGSQAGLQSRDLGEDTLIDAAGGRYQGYRTHYKWDIGLTLRDWRYVVRIANVDVSELTKNASAGADLIDLMTQAVELIPNVGMGRPAFYMPRKIRSFLRRQITNKVAASTLTMEEIAGKKVVAFDGIPCRRTDALLLTEARVV |
| major capsid protein | C | 331 | Bordetella Phage Bpp-1 | MPTLSTTNPTLADVAARMTPDGKIDPQIVEMLNETNEILDDMTVIEANGFTEHKTTVRSGLPTGTWRKLNYGVQPEKSRTVQVKDSMGMLETYAEVDKALADLNGNSAAWRLSEDRAFIEGMNQTQATTLFYGDSSIDAEKFMGLTPRFNSLSAENGQNIIDAGGTGSDNASIWLTVWGPNTLHTIYPKGSQAGLQSRDLGEDTLIDAAGGRYQGYRTHYKWDIGLTLRDWRYVVRIANVDVSELTKNASAGADLIDLMTQAVELIPNVGMGRPAFYMPRKIRSFLRRQITNKVAASTLTMEEIAGKKVVAFDGIPCRRTDALLLTEARVV |
| major capsid protein | D | 331 | Bordetella Phage Bpp-1 | MPTLSTTNPTLADVAARMTPDGKIDPQIVEMLNETNEILDDMTVIEANGFTEHKTTVRSGLPTGTWRKLNYGVQPEKSRTVQVKDSMGMLETYAEVDKALADLNGNSAAWRLSEDRAFIEGMNQTQATTLFYGDSSIDAEKFMGLTPRFNSLSAENGQNIIDAGGTGSDNASIWLTVWGPNTLHTIYPKGSQAGLQSRDLGEDTLIDAAGGRYQGYRTHYKWDIGLTLRDWRYVVRIANVDVSELTKNASAGADLIDLMTQAVELIPNVGMGRPAFYMPRKIRSFLRRQITNKVAASTLTMEEIAGKKVVAFDGIPCRRTDALLLTEARVV |
| major capsid protein | E | 331 | Bordetella Phage Bpp-1 | MPTLSTTNPTLADVAARMTPDGKIDPQIVEMLNETNEILDDMTVIEANGFTEHKTTVRSGLPTGTWRKLNYGVQPEKSRTVQVKDSMGMLETYAEVDKALADLNGNSAAWRLSEDRAFIEGMNQTQATTLFYGDSSIDAEKFMGLTPRFNSLSAENGQNIIDAGGTGSDNASIWLTVWGPNTLHTIYPKGSQAGLQSRDLGEDTLIDAAGGRYQGYRTHYKWDIGLTLRDWRYVVRIANVDVSELTKNASAGADLIDLMTQAVELIPNVGMGRPAFYMPRKIRSFLRRQITNKVAASTLTMEEIAGKKVVAFDGIPCRRTDALLLTEARVV |
| major capsid protein | F | 331 | Bordetella Phage Bpp-1 | MPTLSTTNPTLADVAARMTPDGKIDPQIVEMLNETNEILDDMTVIEANGFTEHKTTVRSGLPTGTWRKLNYGVQPEKSRTVQVKDSMGMLETYAEVDKALADLNGNSAAWRLSEDRAFIEGMNQTQATTLFYGDSSIDAEKFMGLTPRFNSLSAENGQNIIDAGGTGSDNASIWLTVWGPNTLHTIYPKGSQAGLQSRDLGEDTLIDAAGGRYQGYRTHYKWDIGLTLRDWRYVVRIANVDVSELTKNASAGADLIDLMTQAVELIPNVGMGRPAFYMPRKIRSFLRRQITNKVAASTLTMEEIAGKKVVAFDGIPCRRTDALLLTEARVV |
| major capsid protein | G | 331 | Bordetella Phage Bpp-1 | MPTLSTTNPTLADVAARMTPDGKIDPQIVEMLNETNEILDDMTVIEANGFTEHKTTVRSGLPTGTWRKLNYGVQPEKSRTVQVKDSMGMLETYAEVDKALADLNGNSAAWRLSEDRAFIEGMNQTQATTLFYGDSSIDAEKFMGLTPRFNSLSAENGQNIIDAGGTGSDNASIWLTVWGPNTLHTIYPKGSQAGLQSRDLGEDTLIDAAGGRYQGYRTHYKWDIGLTLRDWRYVVRIANVDVSELTKNASAGADLIDLMTQAVELIPNVGMGRPAFYMPRKIRSFLRRQITNKVAASTLTMEEIAGKKVVAFDGIPCRRTDALLLTEARVV |
| cementing protein | H | 140 | Bordetella Phage Bpp-1 | MIIDKLLQVSDGQAVTASAASTDVIDFGQANPNTGMDDRSKMVITVDESADAAGAATVTFSVQDSADNATFADVAATGAIGKANLAAGKQVVIPMPTKLRRYCRVYYTVATGPLTAGKFSAQVVTGIQQNVAYPDSPRIA |
| cementing protein | I | 140 | Bordetella Phage Bpp-1 | MIIDKLLQVSDGQAVTASAASTDVIDFGQANPNTGMDDRSKMVITVDESADAAGAATVTFSVQDSADNATFADVAATGAIGKANLAAGKQVVIPMPTKLRRYCRVYYTVATGPLTAGKFSAQVVTGIQQNVAYPDSPRIA |
| cementing protein | J | 140 | Bordetella Phage Bpp-1 | MIIDKLLQVSDGQAVTASAASTDVIDFGQANPNTGMDDRSKMVITVDESADAAGAATVTFSVQDSADNATFADVAATGAIGKANLAAGKQVVIPMPTKLRRYCRVYYTVATGPLTAGKFSAQVVTGIQQNVAYPDSPRIA |
| cementing protein | K | 140 | Bordetella Phage Bpp-1 | MIIDKLLQVSDGQAVTASAASTDVIDFGQANPNTGMDDRSKMVITVDESADAAGAATVTFSVQDSADNATFADVAATGAIGKANLAAGKQVVIPMPTKLRRYCRVYYTVATGPLTAGKFSAQVVTGIQQNVAYPDSPRIA |
| cementing protein | L | 140 | Bordetella Phage Bpp-1 | MIIDKLLQVSDGQAVTASAASTDVIDFGQANPNTGMDDRSKMVITVDESADAAGAATVTFSVQDSADNATFADVAATGAIGKANLAAGKQVVIPMPTKLRRYCRVYYTVATGPLTAGKFSAQVVTGIQQNVAYPDSPRIA |
| cementing protein | M | 140 | Bordetella Phage Bpp-1 | MIIDKLLQVSDGQAVTASAASTDVIDFGQANPNTGMDDRSKMVITVDESADAAGAATVTFSVQDSADNATFADVAATGAIGKANLAAGKQVVIPMPTKLRRYCRVYYTVATGPLTAGKFSAQVVTGIQQNVAYPDSPRIA |
| cementing protein | N | 140 | Bordetella Phage Bpp-1 | MIIDKLLQVSDGQAVTASAASTDVIDFGQANPNTGMDDRSKMVITVDESADAAGAATVTFSVQDSADNATFADVAATGAIGKANLAAGKQVVIPMPTKLRRYCRVYYTVATGPLTAGKFSAQVVTGIQQNVAYPDSPRIA |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2013-10-09 Deposition Author(s): Czornyj, E. , Guo, H. , Hodes, A. , Hui, W.H. , Jin, L. , Miller, J.F. , Nieh, A.W. , Zhang, X. , Zhou, Z.H.