PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

3IYS

Homology model of avian polyomavirus asymmetric unit

PDB DOI: 10.2210/pdb3iys/pdb

Classification: VIRUS
Organism(s): Budgerigar Fledgling Disease Polyomavirus

Deposited: 2010-04-19
Deposition Author(s): Atwood, W.J. , Baker, T.S. , Belnap, D.M. , Carter, W.S. , Cheng, R.H. , Enderlein, D. , Johne, R. , Kawano, M. , Nelson, C.D.S. , Olson, N.H. , Shen, P.S. , Swenson, R.D. , Xing, L.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 11.3 Å

3iys
Literature

Homology model of avian polyomavirus asymmetric unit

Atwood, W.J. , Baker, T.S. , Belnap, D.M. , Carter, W.S. , Cheng, R.H. , Enderlein, D. , Johne, R. , Kawano, M. , Nelson, C.D.S. , Olson, N.H. , Shen, P.S. , Swenson, R.D. , Xing, L.

Primary Citation of Related Structures: 3IYS


Proteins
Molecule Chains Sequence Length Organism Sequence
Major capsid protein VP1 A 343 Budgerigar Fledgling Disease Polyomavirus MSQKGKGSCPRPQQVPRLLVKGGIEVLDVKSGPDSITTIEAYLQPRPGQKNGYSTVITVQAEGYQDAPHSTEVPCYSCARIPLPTINDDITCPTLLMWEAVSVKTEVVGVSSILNMHSGAFRAFNGYGGGFTICGPRIHFFSVGGEPLDLQACMQNSKTVYPAPLIGPGEGERRETAQVLDTGYKARLDKDGLYPIECWCPDPAKNENTRYYGNLTGGPETPPVLAFTNTTTTILLDENGVGPLCKGDGLFLSAADVAGTYVDQRGRQYWRGLPRYFSIQLRKRNVRNPYPVSGLLNSLFNDLMPRMTGQSMQGSDAQVEEVRVYEGMEGLAPEIDMPPKAPR
Major capsid protein VP1 B 343 Budgerigar Fledgling Disease Polyomavirus MSQKGKGSCPRPQQVPRLLVKGGIEVLDVKSGPDSITTIEAYLQPRPGQKNGYSTVITVQAEGYQDAPHSTEVPCYSCARIPLPTINDDITCPTLLMWEAVSVKTEVVGVSSILNMHSGAFRAFNGYGGGFTICGPRIHFFSVGGEPLDLQACMQNSKTVYPAPLIGPGEGERRETAQVLDTGYKARLDKDGLYPIECWCPDPAKNENTRYYGNLTGGPETPPVLAFTNTTTTILLDENGVGPLCKGDGLFLSAADVAGTYVDQRGRQYWRGLPRYFSIQLRKRNVRNPYPVSGLLNSLFNDLMPRMTGQSMQGSDAQVEEVRVYEGMEGLAPEIDMPPKAPR
Major capsid protein VP1 C 343 Budgerigar Fledgling Disease Polyomavirus MSQKGKGSCPRPQQVPRLLVKGGIEVLDVKSGPDSITTIEAYLQPRPGQKNGYSTVITVQAEGYQDAPHSTEVPCYSCARIPLPTINDDITCPTLLMWEAVSVKTEVVGVSSILNMHSGAFRAFNGYGGGFTICGPRIHFFSVGGEPLDLQACMQNSKTVYPAPLIGPGEGERRETAQVLDTGYKARLDKDGLYPIECWCPDPAKNENTRYYGNLTGGPETPPVLAFTNTTTTILLDENGVGPLCKGDGLFLSAADVAGTYVDQRGRQYWRGLPRYFSIQLRKRNVRNPYPVSGLLNSLFNDLMPRMTGQSMQGSDAQVEEVRVYEGMEGLAPEIDMPPKAPR
Major capsid protein VP1 D 343 Budgerigar Fledgling Disease Polyomavirus MSQKGKGSCPRPQQVPRLLVKGGIEVLDVKSGPDSITTIEAYLQPRPGQKNGYSTVITVQAEGYQDAPHSTEVPCYSCARIPLPTINDDITCPTLLMWEAVSVKTEVVGVSSILNMHSGAFRAFNGYGGGFTICGPRIHFFSVGGEPLDLQACMQNSKTVYPAPLIGPGEGERRETAQVLDTGYKARLDKDGLYPIECWCPDPAKNENTRYYGNLTGGPETPPVLAFTNTTTTILLDENGVGPLCKGDGLFLSAADVAGTYVDQRGRQYWRGLPRYFSIQLRKRNVRNPYPVSGLLNSLFNDLMPRMTGQSMQGSDAQVEEVRVYEGMEGLAPEIDMPPKAPR
Major capsid protein VP1 E 343 Budgerigar Fledgling Disease Polyomavirus MSQKGKGSCPRPQQVPRLLVKGGIEVLDVKSGPDSITTIEAYLQPRPGQKNGYSTVITVQAEGYQDAPHSTEVPCYSCARIPLPTINDDITCPTLLMWEAVSVKTEVVGVSSILNMHSGAFRAFNGYGGGFTICGPRIHFFSVGGEPLDLQACMQNSKTVYPAPLIGPGEGERRETAQVLDTGYKARLDKDGLYPIECWCPDPAKNENTRYYGNLTGGPETPPVLAFTNTTTTILLDENGVGPLCKGDGLFLSAADVAGTYVDQRGRQYWRGLPRYFSIQLRKRNVRNPYPVSGLLNSLFNDLMPRMTGQSMQGSDAQVEEVRVYEGMEGLAPEIDMPPKAPR
Major capsid protein VP1 F 343 Budgerigar Fledgling Disease Polyomavirus MSQKGKGSCPRPQQVPRLLVKGGIEVLDVKSGPDSITTIEAYLQPRPGQKNGYSTVITVQAEGYQDAPHSTEVPCYSCARIPLPTINDDITCPTLLMWEAVSVKTEVVGVSSILNMHSGAFRAFNGYGGGFTICGPRIHFFSVGGEPLDLQACMQNSKTVYPAPLIGPGEGERRETAQVLDTGYKARLDKDGLYPIECWCPDPAKNENTRYYGNLTGGPETPPVLAFTNTTTTILLDENGVGPLCKGDGLFLSAADVAGTYVDQRGRQYWRGLPRYFSIQLRKRNVRNPYPVSGLLNSLFNDLMPRMTGQSMQGSDAQVEEVRVYEGMEGLAPEIDMPPKAPR
Experimental Data

Method: ELECTRON MICROSCOPY