PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

3IXV

Scorpion hemocyanin resting state pseudo atomic model built based on cryo-em density map

PDB DOI: 10.2210/pdb3ixv/pdb

Classification: OXYGEN BINDING
Organism(s): Androctonus Australis

Deposited: 2009-02-13
Deposition Author(s): Chiu, W. , Cong, Y. , Decker, H. , Khant, H. , Ludtke, S. , Schweikardt, T. , Woolford, D. , Zhang, Q.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 6.8 Å

3ixv
Literature

Scorpion hemocyanin resting state pseudo atomic model built based on cryo-em density map

Chiu, W. , Cong, Y. , Decker, H. , Khant, H. , Ludtke, S. , Schweikardt, T. , Woolford, D. , Zhang, Q.

Primary Citation of Related Structures: 3IXV


Proteins
Molecule Chains Sequence Length Organism Sequence
Hemocyanin AA6 chain A 626 Androctonus Australis TVADKQARLMPLFKHLTALTREKLPLDQRDERLKGVGILPRGTLFSCFHARHLAEATELYVALYGAKDFNDFIHLCEQARQIVNEGMFVYAVSVAVLHREDCKGITVPPIQEVFPDRFVPAETINRANKEASNHPDQQSIVVEAEETGNILDPEYKLSYFREDIGINAHHWHWHIVYPATWNPTVMGKEKDRKGELFFYMHQQMCARYDSERLSNGLQRMIPFHNFDEPLEGYAPHLTSLVSGLQYASRPEGYSIHDLSDVDVQDMVRWRERILDAINMHYIVDKDNNKIPLDIEHGTDILGDIIESSDESKNVEYYGSLHNWGHVMMANITDPDHRFQENPGVMSDTSTSLRDPIFYRWHRFIDNIFQEHKKSFHPYTKEELSFPGVEVVGVSINSKTANVITTLIKESLLELSHGINFGTDQSVKVKYHHLDHEPFTYNIVVENNSGAEKHSTVRIFLAPKYDELNNKLEPDEQRRLFIELDKFFYTLTPGKNTIVRNHQDSSVTISKVRTFDQLGAGEGVSEDSTEYCSCGWPEHMLIPRGSHKGMEFELFVMLTDHDEDTVAGLSENAVCSDAVSYCGARDDRYPDKKAMGFPFDRKIEARTAAEFLTPNMGLTDIKIKFHG
Hemocyanin AA6 chain C 626 Androctonus Australis TVADKQARLMPLFKHLTALTREKLPLDQRDERLKGVGILPRGTLFSCFHARHLAEATELYVALYGAKDFNDFIHLCEQARQIVNEGMFVYAVSVAVLHREDCKGITVPPIQEVFPDRFVPAETINRANKEASNHPDQQSIVVEAEETGNILDPEYKLSYFREDIGINAHHWHWHIVYPATWNPTVMGKEKDRKGELFFYMHQQMCARYDSERLSNGLQRMIPFHNFDEPLEGYAPHLTSLVSGLQYASRPEGYSIHDLSDVDVQDMVRWRERILDAINMHYIVDKDNNKIPLDIEHGTDILGDIIESSDESKNVEYYGSLHNWGHVMMANITDPDHRFQENPGVMSDTSTSLRDPIFYRWHRFIDNIFQEHKKSFHPYTKEELSFPGVEVVGVSINSKTANVITTLIKESLLELSHGINFGTDQSVKVKYHHLDHEPFTYNIVVENNSGAEKHSTVRIFLAPKYDELNNKLEPDEQRRLFIELDKFFYTLTPGKNTIVRNHQDSSVTISKVRTFDQLGAGEGVSEDSTEYCSCGWPEHMLIPRGSHKGMEFELFVMLTDHDEDTVAGLSENAVCSDAVSYCGARDDRYPDKKAMGFPFDRKIEARTAAEFLTPNMGLTDIKIKFHG
Hemocyanin AA6 chain D 626 Androctonus Australis TVADKQARLMPLFKHLTALTREKLPLDQRDERLKGVGILPRGTLFSCFHARHLAEATELYVALYGAKDFNDFIHLCEQARQIVNEGMFVYAVSVAVLHREDCKGITVPPIQEVFPDRFVPAETINRANKEASNHPDQQSIVVEAEETGNILDPEYKLSYFREDIGINAHHWHWHIVYPATWNPTVMGKEKDRKGELFFYMHQQMCARYDSERLSNGLQRMIPFHNFDEPLEGYAPHLTSLVSGLQYASRPEGYSIHDLSDVDVQDMVRWRERILDAINMHYIVDKDNNKIPLDIEHGTDILGDIIESSDESKNVEYYGSLHNWGHVMMANITDPDHRFQENPGVMSDTSTSLRDPIFYRWHRFIDNIFQEHKKSFHPYTKEELSFPGVEVVGVSINSKTANVITTLIKESLLELSHGINFGTDQSVKVKYHHLDHEPFTYNIVVENNSGAEKHSTVRIFLAPKYDELNNKLEPDEQRRLFIELDKFFYTLTPGKNTIVRNHQDSSVTISKVRTFDQLGAGEGVSEDSTEYCSCGWPEHMLIPRGSHKGMEFELFVMLTDHDEDTVAGLSENAVCSDAVSYCGARDDRYPDKKAMGFPFDRKIEARTAAEFLTPNMGLTDIKIKFHG
Hemocyanin AA6 chain E 626 Androctonus Australis TVADKQARLMPLFKHLTALTREKLPLDQRDERLKGVGILPRGTLFSCFHARHLAEATELYVALYGAKDFNDFIHLCEQARQIVNEGMFVYAVSVAVLHREDCKGITVPPIQEVFPDRFVPAETINRANKEASNHPDQQSIVVEAEETGNILDPEYKLSYFREDIGINAHHWHWHIVYPATWNPTVMGKEKDRKGELFFYMHQQMCARYDSERLSNGLQRMIPFHNFDEPLEGYAPHLTSLVSGLQYASRPEGYSIHDLSDVDVQDMVRWRERILDAINMHYIVDKDNNKIPLDIEHGTDILGDIIESSDESKNVEYYGSLHNWGHVMMANITDPDHRFQENPGVMSDTSTSLRDPIFYRWHRFIDNIFQEHKKSFHPYTKEELSFPGVEVVGVSINSKTANVITTLIKESLLELSHGINFGTDQSVKVKYHHLDHEPFTYNIVVENNSGAEKHSTVRIFLAPKYDELNNKLEPDEQRRLFIELDKFFYTLTPGKNTIVRNHQDSSVTISKVRTFDQLGAGEGVSEDSTEYCSCGWPEHMLIPRGSHKGMEFELFVMLTDHDEDTVAGLSENAVCSDAVSYCGARDDRYPDKKAMGFPFDRKIEARTAAEFLTPNMGLTDIKIKFHG
Hemocyanin AA6 chain F 626 Androctonus Australis TVADKQARLMPLFKHLTALTREKLPLDQRDERLKGVGILPRGTLFSCFHARHLAEATELYVALYGAKDFNDFIHLCEQARQIVNEGMFVYAVSVAVLHREDCKGITVPPIQEVFPDRFVPAETINRANKEASNHPDQQSIVVEAEETGNILDPEYKLSYFREDIGINAHHWHWHIVYPATWNPTVMGKEKDRKGELFFYMHQQMCARYDSERLSNGLQRMIPFHNFDEPLEGYAPHLTSLVSGLQYASRPEGYSIHDLSDVDVQDMVRWRERILDAINMHYIVDKDNNKIPLDIEHGTDILGDIIESSDESKNVEYYGSLHNWGHVMMANITDPDHRFQENPGVMSDTSTSLRDPIFYRWHRFIDNIFQEHKKSFHPYTKEELSFPGVEVVGVSINSKTANVITTLIKESLLELSHGINFGTDQSVKVKYHHLDHEPFTYNIVVENNSGAEKHSTVRIFLAPKYDELNNKLEPDEQRRLFIELDKFFYTLTPGKNTIVRNHQDSSVTISKVRTFDQLGAGEGVSEDSTEYCSCGWPEHMLIPRGSHKGMEFELFVMLTDHDEDTVAGLSENAVCSDAVSYCGARDDRYPDKKAMGFPFDRKIEARTAAEFLTPNMGLTDIKIKFHG
Hemocyanin AA6 chain G 626 Androctonus Australis TVADKQARLMPLFKHLTALTREKLPLDQRDERLKGVGILPRGTLFSCFHARHLAEATELYVALYGAKDFNDFIHLCEQARQIVNEGMFVYAVSVAVLHREDCKGITVPPIQEVFPDRFVPAETINRANKEASNHPDQQSIVVEAEETGNILDPEYKLSYFREDIGINAHHWHWHIVYPATWNPTVMGKEKDRKGELFFYMHQQMCARYDSERLSNGLQRMIPFHNFDEPLEGYAPHLTSLVSGLQYASRPEGYSIHDLSDVDVQDMVRWRERILDAINMHYIVDKDNNKIPLDIEHGTDILGDIIESSDESKNVEYYGSLHNWGHVMMANITDPDHRFQENPGVMSDTSTSLRDPIFYRWHRFIDNIFQEHKKSFHPYTKEELSFPGVEVVGVSINSKTANVITTLIKESLLELSHGINFGTDQSVKVKYHHLDHEPFTYNIVVENNSGAEKHSTVRIFLAPKYDELNNKLEPDEQRRLFIELDKFFYTLTPGKNTIVRNHQDSSVTISKVRTFDQLGAGEGVSEDSTEYCSCGWPEHMLIPRGSHKGMEFELFVMLTDHDEDTVAGLSENAVCSDAVSYCGARDDRYPDKKAMGFPFDRKIEARTAAEFLTPNMGLTDIKIKFHG
Hemocyanin AA6 chain H 626 Androctonus Australis TVADKQARLMPLFKHLTALTREKLPLDQRDERLKGVGILPRGTLFSCFHARHLAEATELYVALYGAKDFNDFIHLCEQARQIVNEGMFVYAVSVAVLHREDCKGITVPPIQEVFPDRFVPAETINRANKEASNHPDQQSIVVEAEETGNILDPEYKLSYFREDIGINAHHWHWHIVYPATWNPTVMGKEKDRKGELFFYMHQQMCARYDSERLSNGLQRMIPFHNFDEPLEGYAPHLTSLVSGLQYASRPEGYSIHDLSDVDVQDMVRWRERILDAINMHYIVDKDNNKIPLDIEHGTDILGDIIESSDESKNVEYYGSLHNWGHVMMANITDPDHRFQENPGVMSDTSTSLRDPIFYRWHRFIDNIFQEHKKSFHPYTKEELSFPGVEVVGVSINSKTANVITTLIKESLLELSHGINFGTDQSVKVKYHHLDHEPFTYNIVVENNSGAEKHSTVRIFLAPKYDELNNKLEPDEQRRLFIELDKFFYTLTPGKNTIVRNHQDSSVTISKVRTFDQLGAGEGVSEDSTEYCSCGWPEHMLIPRGSHKGMEFELFVMLTDHDEDTVAGLSENAVCSDAVSYCGARDDRYPDKKAMGFPFDRKIEARTAAEFLTPNMGLTDIKIKFHG
Hemocyanin AA6 chain I 626 Androctonus Australis TVADKQARLMPLFKHLTALTREKLPLDQRDERLKGVGILPRGTLFSCFHARHLAEATELYVALYGAKDFNDFIHLCEQARQIVNEGMFVYAVSVAVLHREDCKGITVPPIQEVFPDRFVPAETINRANKEASNHPDQQSIVVEAEETGNILDPEYKLSYFREDIGINAHHWHWHIVYPATWNPTVMGKEKDRKGELFFYMHQQMCARYDSERLSNGLQRMIPFHNFDEPLEGYAPHLTSLVSGLQYASRPEGYSIHDLSDVDVQDMVRWRERILDAINMHYIVDKDNNKIPLDIEHGTDILGDIIESSDESKNVEYYGSLHNWGHVMMANITDPDHRFQENPGVMSDTSTSLRDPIFYRWHRFIDNIFQEHKKSFHPYTKEELSFPGVEVVGVSINSKTANVITTLIKESLLELSHGINFGTDQSVKVKYHHLDHEPFTYNIVVENNSGAEKHSTVRIFLAPKYDELNNKLEPDEQRRLFIELDKFFYTLTPGKNTIVRNHQDSSVTISKVRTFDQLGAGEGVSEDSTEYCSCGWPEHMLIPRGSHKGMEFELFVMLTDHDEDTVAGLSENAVCSDAVSYCGARDDRYPDKKAMGFPFDRKIEARTAAEFLTPNMGLTDIKIKFHG
Hemocyanin AA6 chain J 626 Androctonus Australis TVADKQARLMPLFKHLTALTREKLPLDQRDERLKGVGILPRGTLFSCFHARHLAEATELYVALYGAKDFNDFIHLCEQARQIVNEGMFVYAVSVAVLHREDCKGITVPPIQEVFPDRFVPAETINRANKEASNHPDQQSIVVEAEETGNILDPEYKLSYFREDIGINAHHWHWHIVYPATWNPTVMGKEKDRKGELFFYMHQQMCARYDSERLSNGLQRMIPFHNFDEPLEGYAPHLTSLVSGLQYASRPEGYSIHDLSDVDVQDMVRWRERILDAINMHYIVDKDNNKIPLDIEHGTDILGDIIESSDESKNVEYYGSLHNWGHVMMANITDPDHRFQENPGVMSDTSTSLRDPIFYRWHRFIDNIFQEHKKSFHPYTKEELSFPGVEVVGVSINSKTANVITTLIKESLLELSHGINFGTDQSVKVKYHHLDHEPFTYNIVVENNSGAEKHSTVRIFLAPKYDELNNKLEPDEQRRLFIELDKFFYTLTPGKNTIVRNHQDSSVTISKVRTFDQLGAGEGVSEDSTEYCSCGWPEHMLIPRGSHKGMEFELFVMLTDHDEDTVAGLSENAVCSDAVSYCGARDDRYPDKKAMGFPFDRKIEARTAAEFLTPNMGLTDIKIKFHG
Hemocyanin AA6 chain K 626 Androctonus Australis TVADKQARLMPLFKHLTALTREKLPLDQRDERLKGVGILPRGTLFSCFHARHLAEATELYVALYGAKDFNDFIHLCEQARQIVNEGMFVYAVSVAVLHREDCKGITVPPIQEVFPDRFVPAETINRANKEASNHPDQQSIVVEAEETGNILDPEYKLSYFREDIGINAHHWHWHIVYPATWNPTVMGKEKDRKGELFFYMHQQMCARYDSERLSNGLQRMIPFHNFDEPLEGYAPHLTSLVSGLQYASRPEGYSIHDLSDVDVQDMVRWRERILDAINMHYIVDKDNNKIPLDIEHGTDILGDIIESSDESKNVEYYGSLHNWGHVMMANITDPDHRFQENPGVMSDTSTSLRDPIFYRWHRFIDNIFQEHKKSFHPYTKEELSFPGVEVVGVSINSKTANVITTLIKESLLELSHGINFGTDQSVKVKYHHLDHEPFTYNIVVENNSGAEKHSTVRIFLAPKYDELNNKLEPDEQRRLFIELDKFFYTLTPGKNTIVRNHQDSSVTISKVRTFDQLGAGEGVSEDSTEYCSCGWPEHMLIPRGSHKGMEFELFVMLTDHDEDTVAGLSENAVCSDAVSYCGARDDRYPDKKAMGFPFDRKIEARTAAEFLTPNMGLTDIKIKFHG
Hemocyanin AA6 chain L 626 Androctonus Australis TVADKQARLMPLFKHLTALTREKLPLDQRDERLKGVGILPRGTLFSCFHARHLAEATELYVALYGAKDFNDFIHLCEQARQIVNEGMFVYAVSVAVLHREDCKGITVPPIQEVFPDRFVPAETINRANKEASNHPDQQSIVVEAEETGNILDPEYKLSYFREDIGINAHHWHWHIVYPATWNPTVMGKEKDRKGELFFYMHQQMCARYDSERLSNGLQRMIPFHNFDEPLEGYAPHLTSLVSGLQYASRPEGYSIHDLSDVDVQDMVRWRERILDAINMHYIVDKDNNKIPLDIEHGTDILGDIIESSDESKNVEYYGSLHNWGHVMMANITDPDHRFQENPGVMSDTSTSLRDPIFYRWHRFIDNIFQEHKKSFHPYTKEELSFPGVEVVGVSINSKTANVITTLIKESLLELSHGINFGTDQSVKVKYHHLDHEPFTYNIVVENNSGAEKHSTVRIFLAPKYDELNNKLEPDEQRRLFIELDKFFYTLTPGKNTIVRNHQDSSVTISKVRTFDQLGAGEGVSEDSTEYCSCGWPEHMLIPRGSHKGMEFELFVMLTDHDEDTVAGLSENAVCSDAVSYCGARDDRYPDKKAMGFPFDRKIEARTAAEFLTPNMGLTDIKIKFHG
Hemocyanin AA6 chain M 626 Androctonus Australis TVADKQARLMPLFKHLTALTREKLPLDQRDERLKGVGILPRGTLFSCFHARHLAEATELYVALYGAKDFNDFIHLCEQARQIVNEGMFVYAVSVAVLHREDCKGITVPPIQEVFPDRFVPAETINRANKEASNHPDQQSIVVEAEETGNILDPEYKLSYFREDIGINAHHWHWHIVYPATWNPTVMGKEKDRKGELFFYMHQQMCARYDSERLSNGLQRMIPFHNFDEPLEGYAPHLTSLVSGLQYASRPEGYSIHDLSDVDVQDMVRWRERILDAINMHYIVDKDNNKIPLDIEHGTDILGDIIESSDESKNVEYYGSLHNWGHVMMANITDPDHRFQENPGVMSDTSTSLRDPIFYRWHRFIDNIFQEHKKSFHPYTKEELSFPGVEVVGVSINSKTANVITTLIKESLLELSHGINFGTDQSVKVKYHHLDHEPFTYNIVVENNSGAEKHSTVRIFLAPKYDELNNKLEPDEQRRLFIELDKFFYTLTPGKNTIVRNHQDSSVTISKVRTFDQLGAGEGVSEDSTEYCSCGWPEHMLIPRGSHKGMEFELFVMLTDHDEDTVAGLSENAVCSDAVSYCGARDDRYPDKKAMGFPFDRKIEARTAAEFLTPNMGLTDIKIKFHG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2009-02-13
Deposition Author(s): Chiu, W. , Cong, Y. , Decker, H. , Khant, H. , Ludtke, S. , Schweikardt, T. , Woolford, D. , Zhang, Q.