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FASTA Sequence PDB Format mmCIF Format
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3IVK

Crystal structure of the catalytic core of an rna polymerase ribozyme complexed with an antigen binding antibody fragment

PDB DOI: 10.2210/pdb3ivk/pdb

Classification: immune system / RNA
Organism(s): Mus Musculus , Synthetic Construct

Deposited: 2009-09-01
Deposition Author(s): Bartel, D.P. , Duguid, E.M. , Koide, S. , Koldobskaya, Y. , Kossiakoff, A.A. , Piccirilli, J.A. , Shechner, D.M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.1 Å

3ivk
Literature

Crystal structure of the catalytic core of an rna polymerase ribozyme complexed with an antigen binding antibody fragment

Bartel, D.P. , Duguid, E.M. , Koide, S. , Koldobskaya, Y. , Kossiakoff, A.A. , Piccirilli, J.A. , Shechner, D.M.

Primary Citation of Related Structures: 3IVK


Proteins
Molecule Chains Sequence Length Organism Sequence
Fab light chain L 213 Mus Musculus , Synthetic Construct SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPSTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
Fab light chain B 213 Mus Musculus , Synthetic Construct SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPSTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
Fab heavy chain H 224 Mus Musculus , Synthetic Construct SEVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
Fab heavy chain A 224 Mus Musculus , Synthetic Construct SEVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
class I ligase product m 128 NA UCCAGUAGGAACACUAUACUACUGGAUAAUCAAAGACAAAUCUGCCCGAAGGGCUUGAGAACAUCGAAACACGAUGCAGAGGUGGCAGCCUCCGGUGGGUUAAAACCCAACGUUCUCAACAAUAGUGA
class I ligase product c 128 NA UCCAGUAGGAACACUAUACUACUGGAUAAUCAAAGACAAAUCUGCCCGAAGGGCUUGAGAACAUCGAAACACGAUGCAGAGGUGGCAGCCUCCGGUGGGUUAAAACCCAACGUUCUCAACAAUAGUGA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2009-09-01
Deposition Author(s): Bartel, D.P. , Duguid, E.M. , Koide, S. , Koldobskaya, Y. , Kossiakoff, A.A. , Piccirilli, J.A. , Shechner, D.M.