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FASTA Sequence PDB Format mmCIF Format
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3ITB

Crystal structure of penicillin-binding protein 6 (pbp6) from e. coli in complex with a substrate fragment

PDB DOI: 10.2210/pdb3itb/pdb

Classification: HYDROLASE
Organism(s): Escherichia Coli , Synthetic Construct

Deposited: 2009-08-27
Deposition Author(s): Chen, Y. , Hesek, D. , Lee, M. , Mobashery, S. , Shi, Q. , Shoichet, B.K. , Zhang, W.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.8 Å

3itb
Literature

Crystal structure of penicillin-binding protein 6 (pbp6) from e. coli in complex with a substrate fragment

Chen, Y. , Hesek, D. , Lee, M. , Mobashery, S. , Shi, Q. , Shoichet, B.K. , Zhang, W.

Primary Citation of Related Structures: 3ITB


Proteins
Molecule Chains Sequence Length Organism Sequence
D-alanyl-D-alanine carboxypeptidase DacC A 352 Escherichia Coli , Synthetic Construct MAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGEAGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTIDFQLNGKSIEQRPLIVMENVEEGG
D-alanyl-D-alanine carboxypeptidase DacC B 352 Escherichia Coli , Synthetic Construct MAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGEAGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTIDFQLNGKSIEQRPLIVMENVEEGG
D-alanyl-D-alanine carboxypeptidase DacC C 352 Escherichia Coli , Synthetic Construct MAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGEAGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTIDFQLNGKSIEQRPLIVMENVEEGG
D-alanyl-D-alanine carboxypeptidase DacC D 352 Escherichia Coli , Synthetic Construct MAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGEAGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTIDFQLNGKSIEQRPLIVMENVEEGG
Peptidoglycan substrate (AMV)A(FGA)K(DAL)(DAL) L 5 Escherichia Coli , Synthetic Construct AEKAA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2009-08-27
Deposition Author(s): Chen, Y. , Hesek, D. , Lee, M. , Mobashery, S. , Shi, Q. , Shoichet, B.K. , Zhang, W.