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FASTA Sequence PDB Format mmCIF Format
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3IPM

Crystal structure of archaeal 20s proteasome in complex with the c-terminus of pan

PDB DOI: 10.2210/pdb3ipm/pdb

Classification: HYDROLASE/HYDROLASE ACTIVATOR
Organism(s): Methanocaldococcus Jannaschii , Thermoplasma Acidophilum , Trypanosoma Brucei Brucei

Deposited: 2009-08-17
Deposition Author(s): Cheng, Y. , Yu, Y.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 4 Å

3ipm
Literature

Crystal structure of archaeal 20s proteasome in complex with the c-terminus of pan

Cheng, Y. , Yu, Y.

Primary Citation of Related Structures: 3IPM


Proteins
Molecule Chains Sequence Length Organism Sequence
Proteasome subunit alpha A 233 Methanocaldococcus Jannaschii , Thermoplasma Acidophilum , Trypanosoma Brucei Brucei MQQGQMAYDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGNKYRIYDQEEVKKFL
Proteasome subunit alpha B 233 Methanocaldococcus Jannaschii , Thermoplasma Acidophilum , Trypanosoma Brucei Brucei MQQGQMAYDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGNKYRIYDQEEVKKFL
Proteasome subunit alpha C 233 Methanocaldococcus Jannaschii , Thermoplasma Acidophilum , Trypanosoma Brucei Brucei MQQGQMAYDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGNKYRIYDQEEVKKFL
Proteasome subunit alpha D 233 Methanocaldococcus Jannaschii , Thermoplasma Acidophilum , Trypanosoma Brucei Brucei MQQGQMAYDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGNKYRIYDQEEVKKFL
Proteasome subunit alpha E 233 Methanocaldococcus Jannaschii , Thermoplasma Acidophilum , Trypanosoma Brucei Brucei MQQGQMAYDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGNKYRIYDQEEVKKFL
Proteasome subunit alpha F 233 Methanocaldococcus Jannaschii , Thermoplasma Acidophilum , Trypanosoma Brucei Brucei MQQGQMAYDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGNKYRIYDQEEVKKFL
Proteasome subunit alpha G 233 Methanocaldococcus Jannaschii , Thermoplasma Acidophilum , Trypanosoma Brucei Brucei MQQGQMAYDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGNKYRIYDQEEVKKFL
Proteasome subunit beta H 217 Methanocaldococcus Jannaschii , Thermoplasma Acidophilum , Trypanosoma Brucei Brucei MNQTLETGTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKDGYVQLPTDQIESRIRKLGLILHHHHHH
Proteasome subunit beta I 217 Methanocaldococcus Jannaschii , Thermoplasma Acidophilum , Trypanosoma Brucei Brucei MNQTLETGTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKDGYVQLPTDQIESRIRKLGLILHHHHHH
Proteasome subunit beta J 217 Methanocaldococcus Jannaschii , Thermoplasma Acidophilum , Trypanosoma Brucei Brucei MNQTLETGTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKDGYVQLPTDQIESRIRKLGLILHHHHHH
Proteasome subunit beta K 217 Methanocaldococcus Jannaschii , Thermoplasma Acidophilum , Trypanosoma Brucei Brucei MNQTLETGTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKDGYVQLPTDQIESRIRKLGLILHHHHHH
Proteasome subunit beta L 217 Methanocaldococcus Jannaschii , Thermoplasma Acidophilum , Trypanosoma Brucei Brucei MNQTLETGTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKDGYVQLPTDQIESRIRKLGLILHHHHHH
Proteasome subunit beta M 217 Methanocaldococcus Jannaschii , Thermoplasma Acidophilum , Trypanosoma Brucei Brucei MNQTLETGTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKDGYVQLPTDQIESRIRKLGLILHHHHHH
Proteasome subunit beta N 217 Methanocaldococcus Jannaschii , Thermoplasma Acidophilum , Trypanosoma Brucei Brucei MNQTLETGTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKDGYVQLPTDQIESRIRKLGLILHHHHHH
Proteasome activator PA26, Proteasome-activating nucleotidase fusion protein O 239 Methanocaldococcus Jannaschii , Thermoplasma Acidophilum , Trypanosoma Brucei Brucei MAHHHHHHPPKRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAVEAHATIRNSTYGRAQAEKSPEQLLGVLQRYQDLCHNVYCQAETIRTVIAIRIPEHKEADNLGVAVQHAVLKVIDELEIKTLGSGEKSGSGGAPTPIGMYALREYLSARSTVEDKLLGSVDAESGKTKGGSQSPSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYLLNWKKLIQPRGGHLDVLYR
Proteasome activator PA26, Proteasome-activating nucleotidase fusion protein P 239 Methanocaldococcus Jannaschii , Thermoplasma Acidophilum , Trypanosoma Brucei Brucei MAHHHHHHPPKRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAVEAHATIRNSTYGRAQAEKSPEQLLGVLQRYQDLCHNVYCQAETIRTVIAIRIPEHKEADNLGVAVQHAVLKVIDELEIKTLGSGEKSGSGGAPTPIGMYALREYLSARSTVEDKLLGSVDAESGKTKGGSQSPSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYLLNWKKLIQPRGGHLDVLYR
Proteasome activator PA26, Proteasome-activating nucleotidase fusion protein Q 239 Methanocaldococcus Jannaschii , Thermoplasma Acidophilum , Trypanosoma Brucei Brucei MAHHHHHHPPKRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAVEAHATIRNSTYGRAQAEKSPEQLLGVLQRYQDLCHNVYCQAETIRTVIAIRIPEHKEADNLGVAVQHAVLKVIDELEIKTLGSGEKSGSGGAPTPIGMYALREYLSARSTVEDKLLGSVDAESGKTKGGSQSPSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYLLNWKKLIQPRGGHLDVLYR
Proteasome activator PA26, Proteasome-activating nucleotidase fusion protein R 239 Methanocaldococcus Jannaschii , Thermoplasma Acidophilum , Trypanosoma Brucei Brucei MAHHHHHHPPKRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAVEAHATIRNSTYGRAQAEKSPEQLLGVLQRYQDLCHNVYCQAETIRTVIAIRIPEHKEADNLGVAVQHAVLKVIDELEIKTLGSGEKSGSGGAPTPIGMYALREYLSARSTVEDKLLGSVDAESGKTKGGSQSPSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYLLNWKKLIQPRGGHLDVLYR
Proteasome activator PA26, Proteasome-activating nucleotidase fusion protein S 239 Methanocaldococcus Jannaschii , Thermoplasma Acidophilum , Trypanosoma Brucei Brucei MAHHHHHHPPKRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAVEAHATIRNSTYGRAQAEKSPEQLLGVLQRYQDLCHNVYCQAETIRTVIAIRIPEHKEADNLGVAVQHAVLKVIDELEIKTLGSGEKSGSGGAPTPIGMYALREYLSARSTVEDKLLGSVDAESGKTKGGSQSPSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYLLNWKKLIQPRGGHLDVLYR
Proteasome activator PA26, Proteasome-activating nucleotidase fusion protein T 239 Methanocaldococcus Jannaschii , Thermoplasma Acidophilum , Trypanosoma Brucei Brucei MAHHHHHHPPKRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAVEAHATIRNSTYGRAQAEKSPEQLLGVLQRYQDLCHNVYCQAETIRTVIAIRIPEHKEADNLGVAVQHAVLKVIDELEIKTLGSGEKSGSGGAPTPIGMYALREYLSARSTVEDKLLGSVDAESGKTKGGSQSPSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYLLNWKKLIQPRGGHLDVLYR
Proteasome activator PA26, Proteasome-activating nucleotidase fusion protein U 239 Methanocaldococcus Jannaschii , Thermoplasma Acidophilum , Trypanosoma Brucei Brucei MAHHHHHHPPKRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAVEAHATIRNSTYGRAQAEKSPEQLLGVLQRYQDLCHNVYCQAETIRTVIAIRIPEHKEADNLGVAVQHAVLKVIDELEIKTLGSGEKSGSGGAPTPIGMYALREYLSARSTVEDKLLGSVDAESGKTKGGSQSPSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYLLNWKKLIQPRGGHLDVLYR
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2009-08-17
Deposition Author(s): Cheng, Y. , Yu, Y.