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3IGC

Smallpox virus topoisomerase-dna transition state

PDB DOI: 10.2210/pdb3igc/pdb

Classification: Isomerase/DNA
Organism(s): Variola Virus , Synthetic Construct

Deposited: 2009-07-27
Deposition Author(s): Bushman, F.D. , Hwang, Y. , Perry, K. , Van Duyne, G.D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.1 Å

3igc
Literature

Smallpox virus topoisomerase-dna transition state

Bushman, F.D. , Hwang, Y. , Perry, K. , Van Duyne, G.D.

Primary Citation of Related Structures: 3IGC


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA topoisomerase 1 A 314 Variola Virus , Synthetic Construct MRALFYKDGKLFTDNNFLNPVSDNNPAYEVLQHVKIPTHLTDVVVYGQTWEEALTRLIFVGSDSKGRRQYFYGKMHVQNRNAKRDRIFVRVYNVMKRINSFINKNIKKSSTDSNYQLAVFMLMETMFFIRFGKMKYLKENETVGLLTLKNKHIEISPDKIVIKFVGKDKVSHEFVVHKSNRLYKPLLKLTDDSSPEEFLFNKLSERKVYESIKQFGIRIKDLRTYGVNYTFLYNFWTNVKSISPLPSPKKLIALTIKQTAEVVGHTPSISKRAYMATTILEMVKDKNFLDVVSKTTFDEFLSIVVDHVKSSTDG

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*GP*TP*GP*TP*CP*GP*CP*CP*CP*TP*T)-3' b 11 NA GTGTCGCCCTT
5'-D(*AP*TP*TP*CP*C)-3' c 5 NA ATTCC
5'-D(*CP*GP*GP*AP*AP*TP*AP*AP*GP*GP*GP*CP*GP*AP*CP*A)-3' d 16 NA CGGAATAAGGGCGACA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2009-07-27
Deposition Author(s): Bushman, F.D. , Hwang, Y. , Perry, K. , Van Duyne, G.D.