3HX0
Ternary complex of l277a, h511a, r514 mutant pol lambda bound to a 2 nucleotide gapped dna substrate with a scrunched da
PDB DOI: 10.2210/pdb3hx0/pdb
Classification: TRANSFERASE/DNA Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2009-06-19 Deposition Author(s): Bebenek, K. , Garcia-Diaz, M. , Havener, J.M. , Krahn, J.M. , Kunkel, T.A. , Larrea, A.A. , Pedersen, L.C. , Perera, L. , Ramsden, D.A.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3 Å
Ternary complex of l277a, h511a, r514 mutant pol lambda bound to a 2 nucleotide gapped dna substrate with a scrunched da
Bebenek, K. , Garcia-Diaz, M. , Havener, J.M. , Krahn, J.M. , Kunkel, T.A. , Larrea, A.A. , Pedersen, L.C. , Perera, L. , Ramsden, D.A.
Primary Citation of Related Structures: 3HX0
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA polymerase lambda | A | 335 | Homo Sapiens , Synthetic Construct | MAQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRAAGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAAFNASMRALAKTKGMSLSEHALSTAVVRNTHGAKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW |
| DNA polymerase lambda | F | 335 | Homo Sapiens , Synthetic Construct | MAQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRAAGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAAFNASMRALAKTKGMSLSEHALSTAVVRNTHGAKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW |
| DNA polymerase lambda | K | 335 | Homo Sapiens , Synthetic Construct | MAQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRAAGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAAFNASMRALAKTKGMSLSEHALSTAVVRNTHGAKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW |
| DNA polymerase lambda | P | 335 | Homo Sapiens , Synthetic Construct | MAQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRAAGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAAFNASMRALAKTKGMSLSEHALSTAVVRNTHGAKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(*CP*GP*GP*CP*AP*AP*AP*TP*AP*CP*TP*G)-3' | b | 12 | NA | CGGCAAATACTG |
| 5'-D(*CP*GP*GP*CP*AP*AP*AP*TP*AP*CP*TP*G)-3' | g | 12 | NA | CGGCAAATACTG |
| 5'-D(*CP*GP*GP*CP*AP*AP*AP*TP*AP*CP*TP*G)-3' | l | 12 | NA | CGGCAAATACTG |
| 5'-D(*CP*GP*GP*CP*AP*AP*AP*TP*AP*CP*TP*G)-3' | q | 12 | NA | CGGCAAATACTG |
| 5'-D(*CP*AP*GP*TP*AP*T)-3' | c | 6 | NA | CAGTAT |
| 5'-D(*CP*AP*GP*TP*AP*T)-3' | h | 6 | NA | CAGTAT |
| 5'-D(*CP*AP*GP*TP*AP*T)-3' | m | 6 | NA | CAGTAT |
| 5'-D(*CP*AP*GP*TP*AP*T)-3' | r | 6 | NA | CAGTAT |
| 5'-D(P*GP*CP*CP*G)-3' | d | 4 | NA | GCCG |
| 5'-D(P*GP*CP*CP*G)-3' | i | 4 | NA | GCCG |
| 5'-D(P*GP*CP*CP*G)-3' | n | 4 | NA | GCCG |
| 5'-D(P*GP*CP*CP*G)-3' | s | 4 | NA | GCCG |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2009-06-19 Deposition Author(s): Bebenek, K. , Garcia-Diaz, M. , Havener, J.M. , Krahn, J.M. , Kunkel, T.A. , Larrea, A.A. , Pedersen, L.C. , Perera, L. , Ramsden, D.A.