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3HJW

Structure of a functional ribonucleoprotein pseudouridine synthase bound to a substrate rna

PDB DOI: 10.2210/pdb3hjw/pdb

Classification: ISOMERASE/RNA
Organism(s): Pyrococcus Furiosus , Synthetic Construct

Deposited: 2009-05-22
Deposition Author(s): Kahen, E. , Li, H. , Liang, B. , Terns, M.P. , Terns, R.M. , Zhou, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.35 Å

3hjw
Literature

Structure of a functional ribonucleoprotein pseudouridine synthase bound to a substrate rna

Kahen, E. , Li, H. , Liang, B. , Terns, M.P. , Terns, R.M. , Zhou, J.

Primary Citation of Related Structures: 3HJW


Proteins
Molecule Chains Sequence Length Organism Sequence
Pseudouridine synthase Cbf5 A 327 Pyrococcus Furiosus , Synthetic Construct RILPADIKREVLIKDENAETNPDWGFPPEKRPIEMHIQFGVINLDKPPGPTSHEVVAWIKKILNLEKAGHGGTLDPKVSGVLPVALEKATRVVQALLPAGKEYVALMHLHGDVPEDKIIQVMKEFEGEIIQRPPLRSAVKRRLRTRKVYYIEVLEIEGRDVLFRVGVEAGTYIRSLIHHIGLALGVGAHMSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIKDSAVAAVTHGADLAVPGIAKLHAGIKRGDLVAIMTLKDELVALGKAMMTSQEMLEKTKGIAVDVEKVFMPRDWYPKLW
Ribosome biogenesis protein Nop10 B 53 Pyrococcus Furiosus , Synthetic Construct FRIRKCPKCGRYTLKEVCPVCGEKTKVAHPPRFSPEDPYGEYRRRWKREVLGI
50S ribosomal protein L7Ae C 120 Pyrococcus Furiosus , Synthetic Construct KPSYVKFEVPKELAEKALQAVEIARDTGKIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAGIEVAAASVAIIEPGKARDLVEEIAMKVKELM

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (58-MER) d 58 NA GGGCCACGGAAACCGCGCGCGGUGAUCAAUGAGCCGCGUUCGCUCCCGUGGCCCACAA
5'-R(*GP*AP*GP*CP*GP*(FHU)P*GP*CP*GP*GP*UP*UP*U)-3' e 13 NA GAGCGUGCGGUUU
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2009-05-22
Deposition Author(s): Kahen, E. , Li, H. , Liang, B. , Terns, M.P. , Terns, R.M. , Zhou, J.