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3H8O

Structure determination of dna methylation lesions n1-mea and n3-mec in duplex dna using a cross-linked host-guest system

PDB DOI: 10.2210/pdb3h8o/pdb

Classification: OXIDOREDUCTASE/DNA
Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2009-04-29
Deposition Author(s): Jian, X. , Lu, L. , Yi, C. , Zheng, Q.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2 Å

3h8o
Literature

Structure determination of dna methylation lesions n1-mea and n3-mec in duplex dna using a cross-linked host-guest system

Jian, X. , Lu, L. , Yi, C. , Zheng, Q.

Primary Citation of Related Structures: 3H8O


Proteins
Molecule Chains Sequence Length Organism Sequence
Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 A 209 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GSHSWRHIRAEGLDSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVLINRYKDGSDHIGEHRDDCRELAPGSPIASVSFGASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRKILLTKK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*CP*TP*GP*TP*AP*TP*(2YR)P*AP*TP*(MA7)P*GP*CP*G)-3' b 13 NA CTGTATXATAGCG
5'-D(*TP*CP*GP*CP*TP*AP*TP*AP*AP*TP*AP*CP*A)-3' c 13 NA TCGCTATAATACA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2009-04-29
Deposition Author(s): Jian, X. , Lu, L. , Yi, C. , Zheng, Q.