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3GIL

Dpo4 extension ternary complex with oxog(anti)-t(anti) pair

PDB DOI: 10.2210/pdb3gil/pdb

Classification: TRANSFERASE/DNA
Organism(s): Sulfolobus Solfataricus P2 , Synthetic Construct

Deposited: 2009-03-05
Deposition Author(s): Malinina, L. , Patel, D.J. , Rechkoblit, O.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.71 Å

3gil
Literature

Dpo4 extension ternary complex with oxog(anti)-t(anti) pair

Malinina, L. , Patel, D.J. , Rechkoblit, O.

Primary Citation of Related Structures: 3GIL


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase IV A 341 Sulfolobus Solfataricus P2 , Synthetic Construct GIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFI
DNA polymerase IV B 341 Sulfolobus Solfataricus P2 , Synthetic Construct GIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFI

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(2DT))-3' d 13 NA GTTGGATGGTAGT
5'-D(*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(2DT))-3' h 13 NA GTTGGATGGTAGT
5'-D(*CP*TP*AP*AP*CP*(8OG)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*C)-3' e 18 NA CTAACGCTACCATCCAAC
5'-D(*CP*TP*AP*AP*CP*(8OG)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*C)-3' j 18 NA CTAACGCTACCATCCAAC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2009-03-05
Deposition Author(s): Malinina, L. , Patel, D.J. , Rechkoblit, O.