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FASTA Sequence PDB Format mmCIF Format
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3F9K

Two domain fragment of hiv-2 integrase in complex with ledgf ibd

PDB DOI: 10.2210/pdb3f9k/pdb

Classification: VIRAL PROTEIN, RECOMBINATION
Organism(s): Homo Sapiens , Human Immunodeficiency Virus Type 2

Deposited: 2008-11-14
Deposition Author(s): Cherepanov, P. , Hare, S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.2 Å

Literature

Two domain fragment of hiv-2 integrase in complex with ledgf ibd

Cherepanov, P. , Hare, S.

Primary Citation of Related Structures: 3F9K


Proteins
Molecule Chains Sequence Length Organism Sequence
PC4 and SFRS1-interacting protein A 95 Homo Sapiens , Human Immunodeficiency Virus Type 2 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVLEVLFQ
Integrase B 210 Homo Sapiens , Human Immunodeficiency Virus Type 2 MVLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTEQE
PC4 and SFRS1-interacting protein E 95 Homo Sapiens , Human Immunodeficiency Virus Type 2 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVLEVLFQ
Integrase F 210 Homo Sapiens , Human Immunodeficiency Virus Type 2 MVLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTEQE
PC4 and SFRS1-interacting protein I 95 Homo Sapiens , Human Immunodeficiency Virus Type 2 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVLEVLFQ
Integrase J 210 Homo Sapiens , Human Immunodeficiency Virus Type 2 MVLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTEQE
PC4 and SFRS1-interacting protein M 95 Homo Sapiens , Human Immunodeficiency Virus Type 2 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVLEVLFQ
Integrase N 210 Homo Sapiens , Human Immunodeficiency Virus Type 2 MVLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTEQE
PC4 and SFRS1-interacting protein Q 95 Homo Sapiens , Human Immunodeficiency Virus Type 2 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVLEVLFQ
Integrase R 210 Homo Sapiens , Human Immunodeficiency Virus Type 2 MVLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTEQE
PC4 and SFRS1-interacting protein U 95 Homo Sapiens , Human Immunodeficiency Virus Type 2 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVLEVLFQ
Integrase V 210 Homo Sapiens , Human Immunodeficiency Virus Type 2 MVLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTEQE
Integrase Y 210 Homo Sapiens , Human Immunodeficiency Virus Type 2 MVLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTEQE
Integrase Z 210 Homo Sapiens , Human Immunodeficiency Virus Type 2 MVLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTEQE
PC4 and SFRS1-interacting protein C 95 Homo Sapiens , Human Immunodeficiency Virus Type 2 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVLEVLFQ
Integrase D 210 Homo Sapiens , Human Immunodeficiency Virus Type 2 MVLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTEQE
PC4 and SFRS1-interacting protein G 95 Homo Sapiens , Human Immunodeficiency Virus Type 2 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVLEVLFQ
Integrase H 210 Homo Sapiens , Human Immunodeficiency Virus Type 2 MVLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTEQE
PC4 and SFRS1-interacting protein K 95 Homo Sapiens , Human Immunodeficiency Virus Type 2 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVLEVLFQ
Integrase L 210 Homo Sapiens , Human Immunodeficiency Virus Type 2 MVLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTEQE
PC4 and SFRS1-interacting protein O 95 Homo Sapiens , Human Immunodeficiency Virus Type 2 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVLEVLFQ
Integrase P 210 Homo Sapiens , Human Immunodeficiency Virus Type 2 MVLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTEQE
PC4 and SFRS1-interacting protein S 95 Homo Sapiens , Human Immunodeficiency Virus Type 2 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVLEVLFQ
Integrase T 210 Homo Sapiens , Human Immunodeficiency Virus Type 2 MVLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTEQE
PC4 and SFRS1-interacting protein W 95 Homo Sapiens , Human Immunodeficiency Virus Type 2 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVLEVLFQ
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2008-11-14
Deposition Author(s): Cherepanov, P. , Hare, S.