3F8I
Mouse uhrf1 sra domain bound with hemi-methylated cpg, crystal structure in space group p21
PDB DOI: 10.2210/pdb3f8i/pdb
Classification: LIGASE/DNA Organism(s): Mus Musculus , Synthetic Construct
Deposited: 2008-11-12 Deposition Author(s): Cheng, X. , Hashimoto, H. , Horton, J.R. , Zhang, X.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.29 Å
Mouse uhrf1 sra domain bound with hemi-methylated cpg, crystal structure in space group p21
Cheng, X. , Hashimoto, H. , Horton, J.R. , Zhang, X.
Primary Citation of Related Structures: 3F8I
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| E3 ubiquitin-protein ligase UHRF1 | A | 212 | Mus Musculus , Synthetic Construct | HMPANHFGPIPGVPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDNGNYFTYTGSGGRDLSGNKRTAGQSSDQKLTNNNRALALNCHSPINEKGAEAEDWRQGKPVRVVRNMKGGKHSKYAPAEGNRYDGIYKVVKYWPERGKSGFLVWRYLLRRDDTEPEPWTREGKDRTRQLGLTMQYPEGYLEALANKEKSRKR |
| E3 ubiquitin-protein ligase UHRF1 | B | 212 | Mus Musculus , Synthetic Construct | HMPANHFGPIPGVPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDNGNYFTYTGSGGRDLSGNKRTAGQSSDQKLTNNNRALALNCHSPINEKGAEAEDWRQGKPVRVVRNMKGGKHSKYAPAEGNRYDGIYKVVKYWPERGKSGFLVWRYLLRRDDTEPEPWTREGKDRTRQLGLTMQYPEGYLEALANKEKSRKR |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(*DCP*DCP*DAP*DTP*DGP*(5CM)P*DGP*DCP*DTP*DGP*DAP*DC)-3' | d | 12 | NA | CCATGCGCTGAC |
| 5'-D(*DCP*DCP*DAP*DTP*DGP*(5CM)P*DGP*DCP*DTP*DGP*DAP*DC)-3' | f | 12 | NA | CCATGCGCTGAC |
| 5'-D(*DGP*DTP*DCP*DAP*DGP*DCP*DGP*DCP*DAP*DTP*DGP*DG)-3' | e | 12 | NA | GTCAGCGCATGG |
| 5'-D(*DGP*DTP*DCP*DAP*DGP*DCP*DGP*DCP*DAP*DTP*DGP*DG)-3' | g | 12 | NA | GTCAGCGCATGG |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2008-11-12 Deposition Author(s): Cheng, X. , Hashimoto, H. , Horton, J.R. , Zhang, X.