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3EH8

Crystal structure of y2 i-anii variant (f13y/s111y)/dna complex with calcium

PDB DOI: 10.2210/pdb3eh8/pdb

Classification: HYDROLASE/DNA
Organism(s): Sphingomonas Sp. Y57 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2008-09-11
Deposition Author(s): Stoddard, B.L. , Takeuchi, R.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.7 Å

3eh8
Literature

Crystal structure of y2 i-anii variant (f13y/s111y)/dna complex with calcium

Stoddard, B.L. , Takeuchi, R.

Primary Citation of Related Structures: 3EH8


Proteins
Molecule Chains Sequence Length Organism Sequence
Intron-encoded DNA endonuclease I-AniI A 254 Sphingomonas Sp. Y57 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GSDLTYAYLVGLYEGDGYFSITKKGKYLTYELGIELSIKDVQLIYKIKKILGIGIVSFRKRNEIEMVALRIRDKNHLKSKILPIFEKYPMFSNKQYDYLRFRNALLSGIIYLEDLPDYTRSDEPLNSIESIINTSYFSAWLVGFIEAEGCFSVYKLNKDDDYLIASFDIAQRDGDILISAIRKYLSFTTKVYLDKTNCSKLKVTSVRSVENIIKFLQNAPVKLLGNKKLQYKLWLKQLRKISRYSEKIKIPSNY
Intron-encoded DNA endonuclease I-AniI D 254 Sphingomonas Sp. Y57 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GSDLTYAYLVGLYEGDGYFSITKKGKYLTYELGIELSIKDVQLIYKIKKILGIGIVSFRKRNEIEMVALRIRDKNHLKSKILPIFEKYPMFSNKQYDYLRFRNALLSGIIYLEDLPDYTRSDEPLNSIESIINTSYFSAWLVGFIEAEGCFSVYKLNKDDDYLIASFDIAQRDGDILISAIRKYLSFTTKVYLDKTNCSKLKVTSVRSVENIIKFLQNAPVKLLGNKKLQYKLWLKQLRKISRYSEKIKIPSNY
Intron-encoded DNA endonuclease I-AniI G 254 Sphingomonas Sp. Y57 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GSDLTYAYLVGLYEGDGYFSITKKGKYLTYELGIELSIKDVQLIYKIKKILGIGIVSFRKRNEIEMVALRIRDKNHLKSKILPIFEKYPMFSNKQYDYLRFRNALLSGIIYLEDLPDYTRSDEPLNSIESIINTSYFSAWLVGFIEAEGCFSVYKLNKDDDYLIASFDIAQRDGDILISAIRKYLSFTTKVYLDKTNCSKLKVTSVRSVENIIKFLQNAPVKLLGNKKLQYKLWLKQLRKISRYSEKIKIPSNY

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
31-MER b 31 NA GCGCGCTGAGGAGGTTTCTCTGTAAAGCGCA
31-MER e 31 NA GCGCGCTGAGGAGGTTTCTCTGTAAAGCGCA
31-MER h 31 NA GCGCGCTGAGGAGGTTTCTCTGTAAAGCGCA
31-MER c 31 NA GCGCTTTACAGAGAAACCTCCTCAGCGCGCT
31-MER f 31 NA GCGCTTTACAGAGAAACCTCCTCAGCGCGCT
31-MER i 31 NA GCGCTTTACAGAGAAACCTCCTCAGCGCGCT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2008-09-11
Deposition Author(s): Stoddard, B.L. , Takeuchi, R.