PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

3DO7

X-ray structure of a nf-kb p52/relb/dna complex

PDB DOI: 10.2210/pdb3do7/pdb

Classification: TRANSCRIPTION/DNA
Organism(s): Homo Sapiens , Mus Musculus , Synthetic Construct

Deposited: 2008-07-03
Deposition Author(s): Fusco, A. , Ghosh, G. , Huang, D.B. , Miller, D. , Vu, D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.05 Å

Literature

X-ray structure of a nf-kb p52/relb/dna complex

Fusco, A. , Ghosh, G. , Huang, D.B. , Miller, D. , Vu, D.

Primary Citation of Related Structures: 3DO7


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*DCP*DGP*DGP*DGP*DAP*DAP*DTP*DTP*DCP*DCP*DC)-3' c 11 NA CGGGAATTCCC
5'-D(*DCP*DGP*DGP*DGP*DAP*DAP*DTP*DTP*DCP*DCP*DC)-3' d 11 NA CGGGAATTCCC
5'-D(*DCP*DGP*DGP*DGP*DAP*DAP*DTP*DTP*DCP*DCP*DC)-3' e 11 NA CGGGAATTCCC

Proteins
Molecule Chains Sequence Length Organism Sequence
Avian reticuloendotheliosis viral (V-rel) oncogene related B A 296 Homo Sapiens , Mus Musculus , Synthetic Construct SCTLGRLVSPGPCPRPYLVITEQPKQRGMRFRYECEGRSAGSILGESSTEASKTQPAIELRDCGGLREVEVTACLVWKDWPHRVHPHSLVGKDCTDGVCRVRLRPHVSPRHSFNNLGIQCVRKKEIEAAIERKIQLGIDPYNAGSLKNHQEVDMNVVRICFQASYRDQQGHLHRMDPILSEPVYDKKSTNTSELRICRINKESGPCTGGEELYLLCDKVQKEDISVVFSTASWEGRADFSQADVHRQIAIVFKTPPYEDLEISEPVTVNVFLQRLTDGVCSEPLPFTYLPRDHDSY
Nuclear factor NF-kappa-B p100 subunit B 293 Homo Sapiens , Mus Musculus , Synthetic Construct GPYLVIVEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYEGPAKIEVDLVTHSDPPRAHAHSLVGKQCSELGICAVSVGPKDMTAQFNNLGVLHVTKKNMMGTMIQKLQRQRLRSRPQGLTEAEQRELEQEAKELKKVMDLSIVRLRFSAFLRDSDGSFSLPLKPVISQPIHDSKSPGASNLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKMKIERPVTVFLQLKRKRGGDVSDSKQFTYYPLV
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2008-07-03
Deposition Author(s): Fusco, A. , Ghosh, G. , Huang, D.B. , Miller, D. , Vu, D.