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3DNL

Molecular structure for the hiv-1 gp120 trimer in the b12-bound state

PDB DOI: 10.2210/pdb3dnl/pdb

Classification: VIRAL PROTEIN
Organism(s): Hiv-1 M:B_Hxb2R

Deposited: 2008-07-02
Deposition Author(s): Bartesaghi, A. , Borgnia, M.J. , Liu, J. , Sapiro, G. , Subramaniam, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 20.0 Å

3dnl
Literature

Molecular structure for the hiv-1 gp120 trimer in the b12-bound state

Bartesaghi, A. , Borgnia, M.J. , Liu, J. , Sapiro, G. , Subramaniam, S.

Primary Citation of Related Structures: 3DNL


Proteins
Molecule Chains Sequence Length Organism Sequence
HIV-1 envelope glycoprotein gp120 A 35 Hiv-1 M:B_Hxb2R TENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTP
HIV-1 envelope glycoprotein gp120 D 35 Hiv-1 M:B_Hxb2R TENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTP
HIV-1 envelope glycoprotein gp120 G 35 Hiv-1 M:B_Hxb2R TENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTP
HIV-1 envelope glycoprotein gp120 B 170 Hiv-1 M:B_Hxb2R TSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSVNFTDNAKTIIVQLNTSVEINCTGAGHCNISRAKWNNTLKQIASKLREQFGNNKTIIFKQSSGGDPEIVTHSFNCGGEFFYCNSTQLFNSTWF
HIV-1 envelope glycoprotein gp120 E 170 Hiv-1 M:B_Hxb2R TSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSVNFTDNAKTIIVQLNTSVEINCTGAGHCNISRAKWNNTLKQIASKLREQFGNNKTIIFKQSSGGDPEIVTHSFNCGGEFFYCNSTQLFNSTWF
HIV-1 envelope glycoprotein gp120 H 170 Hiv-1 M:B_Hxb2R TSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSVNFTDNAKTIIVQLNTSVEINCTGAGHCNISRAKWNNTLKQIASKLREQFGNNKTIIFKQSSGGDPEIVTHSFNCGGEFFYCNSTQLFNSTWF
HIV-1 envelope glycoprotein gp120 C 83 Hiv-1 M:B_Hxb2R GSDTITLPCRIKQIINMWQKVGKAMYAPPISGQIRCSSNITGLLLTRDGGNSNNESEIFRPGGGDMRDNWRSELYKYKVVKIE
HIV-1 envelope glycoprotein gp120 F 83 Hiv-1 M:B_Hxb2R GSDTITLPCRIKQIINMWQKVGKAMYAPPISGQIRCSSNITGLLLTRDGGNSNNESEIFRPGGGDMRDNWRSELYKYKVVKIE
HIV-1 envelope glycoprotein gp120 I 83 Hiv-1 M:B_Hxb2R GSDTITLPCRIKQIINMWQKVGKAMYAPPISGQIRCSSNITGLLLTRDGGNSNNESEIFRPGGGDMRDNWRSELYKYKVVKIE
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2008-07-02
Deposition Author(s): Bartesaghi, A. , Borgnia, M.J. , Liu, J. , Sapiro, G. , Subramaniam, S.