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3D2U

Structure of ul18, a peptide-binding viral mhc mimic, bound to a host inhibitory receptor

PDB DOI: 10.2210/pdb3d2u/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Human Herpesvirus 5 , Synthetic Construct

Deposited: 2008-05-08
Deposition Author(s): Bjorkman, P.J. , Yang, Z.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.21 Å

3d2u
Literature

Structure of ul18, a peptide-binding viral mhc mimic, bound to a host inhibitory receptor

Bjorkman, P.J. , Yang, Z.

Primary Citation of Related Structures: 3D2U


Proteins
Molecule Chains Sequence Length Organism Sequence
UL18 protein A 281 Homo Sapiens , Human Herpesvirus 5 , Synthetic Construct HVLRYGYTGIFDDTSHMTLTVVGIFDGQHFFTYHVQSSDKASSRANGTISWMANVSAAYPTYLDGERAKGDLIFNQTEQNLLELEIALGYRSQSVLTWTHECNTTENGSFVAGYEGFGWDGETLMELKDNLTLWTGPNYEISWLKQQKTYIDGKIKNISEGDTTIQRNYLKGNCTQWSVIYSGFQPPVTHPVVKGGVRNQNDNRAEAFCTSYGFFPGEIQITFIHYGDKVPEDSEPQCNPLLPTLDGTFHQGCYVAIFSNQNYTCRVTHGNWTVEIPISVT
UL18 protein E 281 Homo Sapiens , Human Herpesvirus 5 , Synthetic Construct HVLRYGYTGIFDDTSHMTLTVVGIFDGQHFFTYHVQSSDKASSRANGTISWMANVSAAYPTYLDGERAKGDLIFNQTEQNLLELEIALGYRSQSVLTWTHECNTTENGSFVAGYEGFGWDGETLMELKDNLTLWTGPNYEISWLKQQKTYIDGKIKNISEGDTTIQRNYLKGNCTQWSVIYSGFQPPVTHPVVKGGVRNQNDNRAEAFCTSYGFFPGEIQITFIHYGDKVPEDSEPQCNPLLPTLDGTFHQGCYVAIFSNQNYTCRVTHGNWTVEIPISVT
Beta-2-microglobulin B 99 Homo Sapiens , Human Herpesvirus 5 , Synthetic Construct IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM
Beta-2-microglobulin F 99 Homo Sapiens , Human Herpesvirus 5 , Synthetic Construct IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM
Leukocyte immunoglobulin-like receptor subfamily B member 1 D 198 Homo Sapiens , Human Herpesvirus 5 , Synthetic Construct GHLPKPTLWAEPGSVITQGSPVTLRCQGGQETQEYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHAGRYRCYYGSDTAGRSESSDPLELVVTGAYIKPTLSAQPSPVVNSGGNVTLQCDSQVAFDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLVLG
Leukocyte immunoglobulin-like receptor subfamily B member 1 H 198 Homo Sapiens , Human Herpesvirus 5 , Synthetic Construct GHLPKPTLWAEPGSVITQGSPVTLRCQGGQETQEYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHAGRYRCYYGSDTAGRSESSDPLELVVTGAYIKPTLSAQPSPVVNSGGNVTLQCDSQVAFDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLVLG
Actin G 9 Homo Sapiens , Human Herpesvirus 5 , Synthetic Construct ALPHAILRL
Actin C 9 Homo Sapiens , Human Herpesvirus 5 , Synthetic Construct ALPHAILRL
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2008-05-08
Deposition Author(s): Bjorkman, P.J. , Yang, Z.