3CZ3
Crystal structure of tomato aspermy virus 2b in complex with sirna
PDB DOI: 10.2210/pdb3cz3/pdb
Classification: VIRAL PROTEIN/RNA Organism(s): Tomato Aspermy Virus , Synthetic Construct
Deposited: 2008-04-27 Deposition Author(s): Ding, S.W. , Li, F. , Ma, J.B. , Patel, D.J.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.23 Å
Crystal structure of tomato aspermy virus 2b in complex with sirna
Ding, S.W. , Li, F. , Ma, J.B. , Patel, D.J.
Primary Citation of Related Structures: 3CZ3
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| RNA (5'-R(P*CP*GP*UP*AP*CP*GP*CP*GP*GP*AP*AP*UP*AP*CP*UP*UP*CP*GP*A)-3') | e | 19 | NA | CGUACGCGGAAUACUUCGA |
| RNA (5'-R(P*CP*GP*UP*AP*CP*GP*CP*GP*GP*AP*AP*UP*AP*CP*UP*UP*CP*GP*A)-3') | g | 19 | NA | CGUACGCGGAAUACUUCGA |
| RNA (5'-R(P*UP*CP*GP*AP*AP*GP*UP*AP*UP*UP*CP*CP*GP*CP*GP*UP*AP*CP*G)-3') | f | 19 | NA | UCGAAGUAUUCCGCGUACG |
| RNA (5'-R(P*UP*CP*GP*AP*AP*GP*UP*AP*UP*UP*CP*CP*GP*CP*GP*UP*AP*CP*G)-3') | h | 19 | NA | UCGAAGUAUUCCGCGUACG |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Protein 2b | A | 70 | Tomato Aspermy Virus , Synthetic Construct | SMASIEIPLHEIIRKLERMNQKKQAQRKRHKLNRKERGHKSPSEQRRSELWHARQVELSAINSDNSSDEG |
| Protein 2b | B | 70 | Tomato Aspermy Virus , Synthetic Construct | SMASIEIPLHEIIRKLERMNQKKQAQRKRHKLNRKERGHKSPSEQRRSELWHARQVELSAINSDNSSDEG |
| Protein 2b | C | 70 | Tomato Aspermy Virus , Synthetic Construct | SMASIEIPLHEIIRKLERMNQKKQAQRKRHKLNRKERGHKSPSEQRRSELWHARQVELSAINSDNSSDEG |
| Protein 2b | D | 70 | Tomato Aspermy Virus , Synthetic Construct | SMASIEIPLHEIIRKLERMNQKKQAQRKRHKLNRKERGHKSPSEQRRSELWHARQVELSAINSDNSSDEG |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2008-04-27 Deposition Author(s): Ding, S.W. , Li, F. , Ma, J.B. , Patel, D.J.