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3CWA

Crystal structure of an alka host/guest complex 8oxoguanine:cytosine base pair

PDB DOI: 10.2210/pdb3cwa/pdb

Classification: hydrolase/DNA
Organism(s): Escherichia Coli , Synthetic Construct

Deposited: 2008-04-21
Deposition Author(s): Bowman, B.R. , Lee, S. , Verdine, G.L. , Wang, S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.4 Å

3cwa
Literature

Crystal structure of an alka host/guest complex 8oxoguanine:cytosine base pair

Bowman, B.R. , Lee, S. , Verdine, G.L. , Wang, S.

Primary Citation of Related Structures: 3CWA


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA-3-methyladenine glycosylase 2 A 282 Escherichia Coli , Synthetic Construct MYTLNWQPPYDWSWMLGFLAARAVSSVETVADSYYARSLAVGEYRGVVTAIPDIARHTLHINLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGRLGAARPGLRLPGCVDAFEQGVRAILGQLVSVAMAAKLTARVAQLYGERLDDFPEYICFPTPQRLAAADPQALKALGMPLKRAEALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYLIKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPDEA
DNA-3-methyladenine glycosylase 2 B 282 Escherichia Coli , Synthetic Construct MYTLNWQPPYDWSWMLGFLAARAVSSVETVADSYYARSLAVGEYRGVVTAIPDIARHTLHINLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGRLGAARPGLRLPGCVDAFEQGVRAILGQLVSVAMAAKLTARVAQLYGERLDDFPEYICFPTPQRLAAADPQALKALGMPLKRAEALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYLIKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPDEA
DNA-3-methyladenine glycosylase 2 C 282 Escherichia Coli , Synthetic Construct MYTLNWQPPYDWSWMLGFLAARAVSSVETVADSYYARSLAVGEYRGVVTAIPDIARHTLHINLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGRLGAARPGLRLPGCVDAFEQGVRAILGQLVSVAMAAKLTARVAQLYGERLDDFPEYICFPTPQRLAAADPQALKALGMPLKRAEALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYLIKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPDEA
DNA-3-methyladenine glycosylase 2 D 282 Escherichia Coli , Synthetic Construct MYTLNWQPPYDWSWMLGFLAARAVSSVETVADSYYARSLAVGEYRGVVTAIPDIARHTLHINLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGRLGAARPGLRLPGCVDAFEQGVRAILGQLVSVAMAAKLTARVAQLYGERLDDFPEYICFPTPQRLAAADPQALKALGMPLKRAEALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYLIKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPDEA

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*(8OG)P*DAP*DCP*DAP*DTP*DGP*DAP*DGP*DTP*DGP*DCP*DC)-3') e 12 NA GACATGAGTGCC
DNA (5'-D(*(8OG)P*DAP*DCP*DAP*DTP*DGP*DAP*DGP*DTP*DGP*DCP*DC)-3') g 12 NA GACATGAGTGCC
DNA (5'-D(*DGP*DGP*DCP*DAP*DCP*DTP*DCP*DAP*DTP*DGP*DTP*DC)-3') f 12 NA GGCACTCATGTC
DNA (5'-D(*DGP*DGP*DCP*DAP*DCP*DTP*DCP*DAP*DTP*DGP*DTP*DC)-3') h 12 NA GGCACTCATGTC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2008-04-21
Deposition Author(s): Bowman, B.R. , Lee, S. , Verdine, G.L. , Wang, S.