3CLZ
The set and ring associated (sra) domain of uhrf1 bound to methylated dna
PDB DOI: 10.2210/pdb3clz/pdb
Classification: LIGASE Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2008-03-20 Deposition Author(s): Arrowsmith, C.H. , Avvakumov, G.V. , Bochkarev, A. , Bountra, C. , Dhe-Paganon, S. , Dong, A. , Edwards, A.M. , Li, Y. , Structural Genomics Consortium (Sgc) , Walker, J.R. , Weigelt, J. , Xue, S.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.2 Å
The set and ring associated (sra) domain of uhrf1 bound to methylated dna
Arrowsmith, C.H. , Avvakumov, G.V. , Bochkarev, A. , Bountra, C. , Dhe-Paganon, S. , Dong, A. , Edwards, A.M. , Li, Y. , Structural Genomics Consortium (Sgc) , Walker, J.R. , Weigelt, J. , Xue, S.
Primary Citation of Related Structures: 3CLZ
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| E3 ubiquitin-protein ligase UHRF1 | A | 212 | Homo Sapiens , Synthetic Construct | MPSNHYGPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDHGNFFTYTGSGGRDLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKPVRVVRNVKGGKNSKYAPAEGNRYDGIYKVVKYWPEKGKSGFLVWRYLLRRDDDEPGPWTKEGKDRIKKLGLTMQYPEGYLEALANAHHHHHH |
| E3 ubiquitin-protein ligase UHRF1 | B | 212 | Homo Sapiens , Synthetic Construct | MPSNHYGPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDHGNFFTYTGSGGRDLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKPVRVVRNVKGGKNSKYAPAEGNRYDGIYKVVKYWPEKGKSGFLVWRYLLRRDDDEPGPWTKEGKDRIKKLGLTMQYPEGYLEALANAHHHHHH |
| E3 ubiquitin-protein ligase UHRF1 | C | 212 | Homo Sapiens , Synthetic Construct | MPSNHYGPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDHGNFFTYTGSGGRDLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKPVRVVRNVKGGKNSKYAPAEGNRYDGIYKVVKYWPEKGKSGFLVWRYLLRRDDDEPGPWTKEGKDRIKKLGLTMQYPEGYLEALANAHHHHHH |
| E3 ubiquitin-protein ligase UHRF1 | D | 212 | Homo Sapiens , Synthetic Construct | MPSNHYGPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDHGNFFTYTGSGGRDLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKPVRVVRNVKGGKNSKYAPAEGNRYDGIYKVVKYWPEKGKSGFLVWRYLLRRDDDEPGPWTKEGKDRIKKLGLTMQYPEGYLEALANAHHHHHH |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(*DGP*DGP*DGP*DCP*DCP*(5CM)P*DGP*DCP*DAP*DGP*DGP*DG)-3' | e | 12 | NA | GGGCCCGCAGGG |
| 5'-D(*DGP*DGP*DGP*DCP*DCP*(5CM)P*DGP*DCP*DAP*DGP*DGP*DG)-3' | g | 12 | NA | GGGCCCGCAGGG |
| 5'-D(*DGP*DGP*DGP*DCP*DCP*(5CM)P*DGP*DCP*DAP*DGP*DGP*DG)-3' | i | 12 | NA | GGGCCCGCAGGG |
| 5'-D(*DGP*DGP*DGP*DCP*DCP*(5CM)P*DGP*DCP*DAP*DGP*DGP*DG)-3' | k | 12 | NA | GGGCCCGCAGGG |
| 5'-D(*DCP*DCP*DCP*DTP*DGP*DCP*DGP*DGP*DGP*DCP*DCP*DC)-3' | f | 12 | NA | CCCTGCGGGCCC |
| 5'-D(*DCP*DCP*DCP*DTP*DGP*DCP*DGP*DGP*DGP*DCP*DCP*DC)-3' | h | 12 | NA | CCCTGCGGGCCC |
| 5'-D(*DCP*DCP*DCP*DTP*DGP*DCP*DGP*DGP*DGP*DCP*DCP*DC)-3' | j | 12 | NA | CCCTGCGGGCCC |
| 5'-D(*DCP*DCP*DCP*DTP*DGP*DCP*DGP*DGP*DGP*DCP*DCP*DC)-3' | l | 12 | NA | CCCTGCGGGCCC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2008-03-20 Deposition Author(s): Arrowsmith, C.H. , Avvakumov, G.V. , Bochkarev, A. , Bountra, C. , Dhe-Paganon, S. , Dong, A. , Edwards, A.M. , Li, Y. , Structural Genomics Consortium (Sgc) , Walker, J.R. , Weigelt, J. , Xue, S.