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FASTA Sequence PDB Format mmCIF Format
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3CFI

Nanobody-aided structure determination of the epsi:epsj pseudopilin heterdimer from vibrio vulnificus

PDB DOI: 10.2210/pdb3cfi/pdb

Classification: PROTEIN TRANSPORT/Immune system
Organism(s): Lama Glama , Vibrio Vulnificus

Deposited: 2008-03-03
Deposition Author(s): Hol, W.G.J. , Korotkov, K.V. , Lam, A.Y. , Pardon, E. , Steyaert, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.58 Å

3cfi
Literature

Nanobody-aided structure determination of the epsi:epsj pseudopilin heterdimer from vibrio vulnificus

Hol, W.G.J. , Korotkov, K.V. , Lam, A.Y. , Pardon, E. , Steyaert, J.

Primary Citation of Related Structures: 3CFI


Proteins
Molecule Chains Sequence Length Organism Sequence
Type II secretory pathway, pseudopilin EpsI A 84 Lama Glama , Vibrio Vulnificus INTVGYLEQKMFAAMVADNQMAMVMLNPKNLKASNGEEELAGQTWYWKVAPVATTQPLLKAFDVSVAAEKQASPIITVRSYVAK
Type II secretory pathway, pseudopilin EpsI D 84 Lama Glama , Vibrio Vulnificus INTVGYLEQKMFAAMVADNQMAMVMLNPKNLKASNGEEELAGQTWYWKVAPVATTQPLLKAFDVSVAAEKQASPIITVRSYVAK
Type II secretory pathway, pseudopilin EpsI G 84 Lama Glama , Vibrio Vulnificus INTVGYLEQKMFAAMVADNQMAMVMLNPKNLKASNGEEELAGQTWYWKVAPVATTQPLLKAFDVSVAAEKQASPIITVRSYVAK
Type II secretory pathway, pseudopilin EpsI J 84 Lama Glama , Vibrio Vulnificus INTVGYLEQKMFAAMVADNQMAMVMLNPKNLKASNGEEELAGQTWYWKVAPVATTQPLLKAFDVSVAAEKQASPIITVRSYVAK
Type II secretory pathway, PSEUDOPILIN EpsJ B 164 Lama Glama , Vibrio Vulnificus NELSQERTARLNELQRALVMMDSDFRQIALRQTRTNGEEPSKKLLHWADYLLDSDNKGIMFARLGWHNPQQQFPRGEVTKVGYRIKDERLERVWWRYPDTPAGQEGVVTPLLSDVEELNVRFYDGKQWINEWSNELTLPAAISVELTLKDYGKIARTYLTPEGN
Type II secretory pathway, PSEUDOPILIN EpsJ E 164 Lama Glama , Vibrio Vulnificus NELSQERTARLNELQRALVMMDSDFRQIALRQTRTNGEEPSKKLLHWADYLLDSDNKGIMFARLGWHNPQQQFPRGEVTKVGYRIKDERLERVWWRYPDTPAGQEGVVTPLLSDVEELNVRFYDGKQWINEWSNELTLPAAISVELTLKDYGKIARTYLTPEGN
Type II secretory pathway, PSEUDOPILIN EpsJ H 164 Lama Glama , Vibrio Vulnificus NELSQERTARLNELQRALVMMDSDFRQIALRQTRTNGEEPSKKLLHWADYLLDSDNKGIMFARLGWHNPQQQFPRGEVTKVGYRIKDERLERVWWRYPDTPAGQEGVVTPLLSDVEELNVRFYDGKQWINEWSNELTLPAAISVELTLKDYGKIARTYLTPEGN
Type II secretory pathway, PSEUDOPILIN EpsJ K 164 Lama Glama , Vibrio Vulnificus NELSQERTARLNELQRALVMMDSDFRQIALRQTRTNGEEPSKKLLHWADYLLDSDNKGIMFARLGWHNPQQQFPRGEVTKVGYRIKDERLERVWWRYPDTPAGQEGVVTPLLSDVEELNVRFYDGKQWINEWSNELTLPAAISVELTLKDYGKIARTYLTPEGN
Nanobody NBEPSIJ_11 C 116 Lama Glama , Vibrio Vulnificus QVQLQESGGGLVQPGGSLRLSCAASGFAFSGYAMSWVRQAPGKGLEWVSGINRDGSTSYTAPVKGRFTISRDNAKNILYLQMNSLRPEDTAVYYCAKWLGGRDWYDRGQGTQVTVS
Nanobody NBEPSIJ_11 F 116 Lama Glama , Vibrio Vulnificus QVQLQESGGGLVQPGGSLRLSCAASGFAFSGYAMSWVRQAPGKGLEWVSGINRDGSTSYTAPVKGRFTISRDNAKNILYLQMNSLRPEDTAVYYCAKWLGGRDWYDRGQGTQVTVS
Nanobody NBEPSIJ_11 I 116 Lama Glama , Vibrio Vulnificus QVQLQESGGGLVQPGGSLRLSCAASGFAFSGYAMSWVRQAPGKGLEWVSGINRDGSTSYTAPVKGRFTISRDNAKNILYLQMNSLRPEDTAVYYCAKWLGGRDWYDRGQGTQVTVS
Nanobody NBEPSIJ_11 L 116 Lama Glama , Vibrio Vulnificus QVQLQESGGGLVQPGGSLRLSCAASGFAFSGYAMSWVRQAPGKGLEWVSGINRDGSTSYTAPVKGRFTISRDNAKNILYLQMNSLRPEDTAVYYCAKWLGGRDWYDRGQGTQVTVS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2008-03-03
Deposition Author(s): Hol, W.G.J. , Korotkov, K.V. , Lam, A.Y. , Pardon, E. , Steyaert, J.