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FASTA Sequence PDB Format mmCIF Format
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3C6L

Crystal structure of mouse mhc class ii i-ab/3k peptide complexed with mouse tcr 2w20

PDB DOI: 10.2210/pdb3c6l/pdb

Classification: SUGAR BINDING PROTEIN/IMMUNE SYSTEM
Organism(s): Mus Musculus

Deposited: 2008-02-04
Deposition Author(s): Dai, S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.4 Å

3c6l
Literature

Crystal structure of mouse mhc class ii i-ab/3k peptide complexed with mouse tcr 2w20

Dai, S.

Primary Citation of Related Structures: 3C6L


Proteins
Molecule Chains Sequence Length Organism Sequence
TCR 2W20 alpha chain A 185 Mus Musculus QQVRQSPQSLTVWEGETAILNCSYEDSTFDYFPWYHQFPGESPALLIAIRPVSNKKEDGRFTIFFNKREKKFSLHIADSQPGDSATYFCAASDNRIFFGDGTQLVVKPNIQNPEPAVYQLKDPRSQDSTLCLFTDFDSQINVPKTMESGTFITDKTVLDMKAMDSKSNGAIAWSNQTSFTCQDIF
TCR 2W20 alpha chain E 185 Mus Musculus QQVRQSPQSLTVWEGETAILNCSYEDSTFDYFPWYHQFPGESPALLIAIRPVSNKKEDGRFTIFFNKREKKFSLHIADSQPGDSATYFCAASDNRIFFGDGTQLVVKPNIQNPEPAVYQLKDPRSQDSTLCLFTDFDSQINVPKTMESGTFITDKTVLDMKAMDSKSNGAIAWSNQTSFTCQDIF
TCR 2W20 beta chain B 236 Mus Musculus AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQTSVYFCASGDAWGYEQYFGPGTRLTVLEDLRDVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGLSEEDKWPEGSPKPVTQDISAEAWGRAD
TCR 2W20 beta chain F 236 Mus Musculus AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQTSVYFCASGDAWGYEQYFGPGTRLTVLEDLRDVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGLSEEDKWPEGSPKPVTQDISAEAWGRAD
H-2 class II histocompatibility antigen, A-B alpha chain C 182 Mus Musculus IEADHVGTYGISVYQSPGDIGQYTFEFDGDELFYVDLDKKETVWMLPEFGQLASFDPQGGLQNIAVVKHNLGVLTKRSNSTPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVADGVYETSFFVNRDYSFHKLSYLTFIPSDDDIYDCKVEHWGLEEPVLKHWEPE
H-2 class II histocompatibility antigen, A-B alpha chain G 182 Mus Musculus IEADHVGTYGISVYQSPGDIGQYTFEFDGDELFYVDLDKKETVWMLPEFGQLASFDPQGGLQNIAVVKHNLGVLTKRSNSTPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVADGVYETSFFVNRDYSFHKLSYLTFIPSDDDIYDCKVEHWGLEEPVLKHWEPE
3K peptide, Linker,and H-2 class II histocompatibility antigen (A beta chain) D 217 Mus Musculus FEAQKAKANKAVDGGGGSLVPRGSGGGGSERHFVYQFMGECYFTNGTQRIRYVTRYIYNREEYVRYDSDVGEHRAVTELGRPDAEYWNSQPEILERTRAELDTVCRHNYEGPETHTSLRRLEQPNVVISLSRTEALNHHNTLVCSVTDFYPAKIKVRWFRNGQEETVGVSSTQLIRNGDWTFQVLVMLEMTPRRGEVYTCHVEHPSLKSPITVEWKA
3K peptide, Linker,and H-2 class II histocompatibility antigen (A beta chain) H 217 Mus Musculus FEAQKAKANKAVDGGGGSLVPRGSGGGGSERHFVYQFMGECYFTNGTQRIRYVTRYIYNREEYVRYDSDVGEHRAVTELGRPDAEYWNSQPEILERTRAELDTVCRHNYEGPETHTSLRRLEQPNVVISLSRTEALNHHNTLVCSVTDFYPAKIKVRWFRNGQEETVGVSSTQLIRNGDWTFQVLVMLEMTPRRGEVYTCHVEHPSLKSPITVEWKA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2008-02-04
Deposition Author(s): Dai, S.