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3C5G

Structure of a ternary complex of the r517k pol lambda mutant

PDB DOI: 10.2210/pdb3c5g/pdb

Classification: Transferase/DNA, Lyase/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2008-01-31
Deposition Author(s): Bebenek, K. , Foley, M.C. , Garcia-Diaz, M. , Kunkel, T.A. , Pedersen, L.C. , Schlick, T.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.2 Å

Literature

Structure of a ternary complex of the r517k pol lambda mutant

Bebenek, K. , Foley, M.C. , Garcia-Diaz, M. , Kunkel, T.A. , Pedersen, L.C. , Schlick, T.

Primary Citation of Related Structures: 3C5G


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase lambda A 335 Homo Sapiens , Synthetic Construct MAQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMKALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW
DNA polymerase lambda B 335 Homo Sapiens , Synthetic Construct MAQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMKALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*DCP*DGP*DGP*DCP*DAP*DAP*DTP*DAP*DCP*DTP*DG)-3') t 11 NA CGGCAATACTG
DNA (5'-D(*DCP*DGP*DGP*DCP*DAP*DAP*DTP*DAP*DCP*DTP*DG)-3') u 11 NA CGGCAATACTG
DNA (5'-D(*DCP*DAP*DGP*DTP*DAP*(2DT))-3') p 6 NA CAGTAT
DNA (5'-D(*DCP*DAP*DGP*DTP*DAP*(2DT))-3') q 6 NA CAGTAT
DNA (5'-D(P*DGP*DCP*DCP*DG)-3') d 4 NA GCCG
DNA (5'-D(P*DGP*DCP*DCP*DG)-3') e 4 NA GCCG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2008-01-31
Deposition Author(s): Bebenek, K. , Foley, M.C. , Garcia-Diaz, M. , Kunkel, T.A. , Pedersen, L.C. , Schlick, T.