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3BI3

X-ray structure of alkb protein bound to dsdna containing 1mea/a with cofactors

PDB DOI: 10.2210/pdb3bi3/pdb

Classification: Oxidoreductase/DNA
Organism(s): Escherichia Coli K12 , Synthetic Construct

Deposited: 2007-11-29
Deposition Author(s): Yang, C.-G. , Yi, C.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.9 Å

3bi3
Literature

X-ray structure of alkb protein bound to dsdna containing 1mea/a with cofactors

Yang, C.-G. , Yi, C.

Primary Citation of Related Structures: 3BI3


Proteins
Molecule Chains Sequence Length Organism Sequence
Alpha-ketoglutarate-dependent dioxygenase alkB A 201 Escherichia Coli K12 , Synthetic Construct EPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLCLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTIDCRYNLTFRQAG

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*TP*AP*GP*GP*TP*AP*AP*(MA7)P*AP*(2YR)P*CP*GP*T)-3') b 13 NA TAGGTAAAAXCGT
DNA (5'-D(*DAP*DAP*DCP*DGP*DGP*DTP*DAP*DTP*DTP*DAP*DCP*DCP*DT)-3') c 13 NA AACGGTATTACCT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2007-11-29
Deposition Author(s): Yang, C.-G. , Yi, C.