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FASTA Sequence PDB Format mmCIF Format
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3A6N

The nucleosome containing a testis-specific histone variant, human h3t

PDB DOI: 10.2210/pdb3a6n/pdb

Classification: STRUCTURAL PROTEIN/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2009-09-04
Deposition Author(s): Kagawa, W. , Kimura, H. , Koichiro, K. , Kurumizaka, H. , Osakabe, A. , Shiga, T. , Tachiwana, H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.7 Å

Literature

The nucleosome containing a testis-specific histone variant, human h3t

Kagawa, W. , Kimura, H. , Koichiro, K. , Kurumizaka, H. , Osakabe, A. , Shiga, T. , Tachiwana, H.

Primary Citation of Related Structures: 3A6N


Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3.1t A 139 Homo Sapiens , Synthetic Construct GSHMARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTIMPKDIQLARRIRGERA
Histone H3.1t E 139 Homo Sapiens , Synthetic Construct GSHMARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTIMPKDIQLARRIRGERA
Histone H4 B 106 Homo Sapiens , Synthetic Construct GSHMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H4 F 106 Homo Sapiens , Synthetic Construct GSHMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A type 1-B/E C 133 Homo Sapiens , Synthetic Construct GSHMSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKAKGK
Histone H2A type 1-B/E G 133 Homo Sapiens , Synthetic Construct GSHMSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKAKGK
Histone H2B type 1-J D 129 Homo Sapiens , Synthetic Construct GSHMPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Histone H2B type 1-J H 129 Homo Sapiens , Synthetic Construct GSHMPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
146-MER DNA i 146 NA ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCTGAATTCAGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT
146-MER DNA j 146 NA ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCTGAATTCAGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2009-09-04
Deposition Author(s): Kagawa, W. , Kimura, H. , Koichiro, K. , Kurumizaka, H. , Osakabe, A. , Shiga, T. , Tachiwana, H.