PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

3A2K

Crystal structure of tils complexed with trna

PDB DOI: 10.2210/pdb3a2k/pdb

Classification: LIGASE/RNA
Organism(s): Clostridium Acetobutylicum , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2009-05-23
Deposition Author(s): Bonnefond, L. , Ishitani, R. , Nakanishi, K. , Nureki, O.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.65 Å

3a2k
Literature

Crystal structure of tils complexed with trna

Bonnefond, L. , Ishitani, R. , Nakanishi, K. , Nureki, O.

Primary Citation of Related Structures: 3A2K


Proteins
Molecule Chains Sequence Length Organism Sequence
tRNA(Ile)-lysidine synthase A 464 Clostridium Acetobutylicum , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MIDKVRAFIHRHQLLSEGAAVIVGVSGGPDSLALLHVFLSLRDEWKLQVIAAHVDHMFRGRESEEEMEFVKRFCVERRILCETAQIDVPAFQRSAGLGAQEAARICRYRFFAELMEKHQAGYVAVGHHGDDQVETILMRLVRGSTSKGYAGIPVKRPFHGGYLIRPFLAVSRAEIEAYCRQMGLSPRCDPSNEKDDYTRNRFRHHIVPLLRQENPRLHERFQQYSEMMAEDEQFLEELAADALNKVMEKQHRDAALSIGPFLELPRPLQRRVLQLLLLRLYGGVPPTLTSVHIGHILMLCERGRPSGMIDLPKGLKVIRSYDRCLFTFDAESGEKGYWFELPVPALLPLPNGYAIISEFGEHYPRKQAGNDWFVVDPASVSLPLRVRTRRRGDRMVLKGTGGTKKLKEIFIEAKIPRMERDRWPIVEDADGRILWVPGLKKSAFEAQNRGQARYILLQYQAMNS
tRNA(Ile)-lysidine synthase B 464 Clostridium Acetobutylicum , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MIDKVRAFIHRHQLLSEGAAVIVGVSGGPDSLALLHVFLSLRDEWKLQVIAAHVDHMFRGRESEEEMEFVKRFCVERRILCETAQIDVPAFQRSAGLGAQEAARICRYRFFAELMEKHQAGYVAVGHHGDDQVETILMRLVRGSTSKGYAGIPVKRPFHGGYLIRPFLAVSRAEIEAYCRQMGLSPRCDPSNEKDDYTRNRFRHHIVPLLRQENPRLHERFQQYSEMMAEDEQFLEELAADALNKVMEKQHRDAALSIGPFLELPRPLQRRVLQLLLLRLYGGVPPTLTSVHIGHILMLCERGRPSGMIDLPKGLKVIRSYDRCLFTFDAESGEKGYWFELPVPALLPLPNGYAIISEFGEHYPRKQAGNDWFVVDPASVSLPLRVRTRRRGDRMVLKGTGGTKKLKEIFIEAKIPRMERDRWPIVEDADGRILWVPGLKKSAFEAQNRGQARYILLQYQAMNS

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
bacterial tRNA c 77 NA GGACCUUUAGCUCAGUUGGUUAGAGCAGACGGCUCAUAACCGUCCGGCCGUAGGUUCGAGUCCUACAAGGUCCACCA
bacterial tRNA d 77 NA GGACCUUUAGCUCAGUUGGUUAGAGCAGACGGCUCAUAACCGUCCGGCCGUAGGUUCGAGUCCUACAAGGUCCACCA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2009-05-23
Deposition Author(s): Bonnefond, L. , Ishitani, R. , Nakanishi, K. , Nureki, O.