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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

36PP

Vipr ternary complex with a duplex dsdna substrate, 6 subunits

PDB DOI: 10.2210/pdb36pp/pdb

Classification: RNA BINDING PROTEIN/RNA/DNA
Organism(s): Suspvirus Susp1 , Synthetic Construct

Deposited: 2026-06-24
Deposition Author(s): Brohawn, S.G. , Docter, T.A. , Doudna, J.A. , Yoon, P.H. , Zhang, Z.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.3 Å

Literature

Vipr ternary complex with a duplex dsdna substrate, 6 subunits

Brohawn, S.G. , Docter, T.A. , Doudna, J.A. , Yoon, P.H. , Zhang, Z.

Primary Citation of Related Structures: 36PP


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
SUSP1 viprRNA a 94 NA UAUGGUAAGGUGUGGUUCGGUAAGGUGCGGUGGGGUAAGGCUAGGUUUGGUCUGGUGUGGGUGGAUGGUAGUAGCCACGUUAAAAAUCUACCAA
Non-target DNA c 63 NA GTTTAATTGCTACGTCAACGTCTCCAACGCCGGCAACTACTTCCTCGTCGCTAACGTCTAAAT
Target DNA b 63 NA ATTTAGACGTTAGCGACGAGGAAGTAGTTGCCGGCGTTGGAGACGTTGACGTAGCAATTAAAC

Proteins
Molecule Chains Sequence Length Organism Sequence
SUSP1 Vipr protein D 202 Suspvirus Susp1 , Synthetic Construct MKLLNIKITGTRPFLSHADTLSDPLNPLTKYHKSLSSKRKKTDEDYALLAESQLVTSCYYDEQLGFVMNGEMIEACIKSGAKLNKLGKVIDRAIMLTDVVFPMTIKNCPANPQELAKNQDFIYAKSVKIGTARVMSYRPIFRDWSVEFGLMFDEEQITKEELLMVLENAGNLCGVGDWRPRFGRFSVEIMSEGNVENLYFQS
SUSP1 Vipr protein E 202 Suspvirus Susp1 , Synthetic Construct MKLLNIKITGTRPFLSHADTLSDPLNPLTKYHKSLSSKRKKTDEDYALLAESQLVTSCYYDEQLGFVMNGEMIEACIKSGAKLNKLGKVIDRAIMLTDVVFPMTIKNCPANPQELAKNQDFIYAKSVKIGTARVMSYRPIFRDWSVEFGLMFDEEQITKEELLMVLENAGNLCGVGDWRPRFGRFSVEIMSEGNVENLYFQS
SUSP1 Vipr protein F 202 Suspvirus Susp1 , Synthetic Construct MKLLNIKITGTRPFLSHADTLSDPLNPLTKYHKSLSSKRKKTDEDYALLAESQLVTSCYYDEQLGFVMNGEMIEACIKSGAKLNKLGKVIDRAIMLTDVVFPMTIKNCPANPQELAKNQDFIYAKSVKIGTARVMSYRPIFRDWSVEFGLMFDEEQITKEELLMVLENAGNLCGVGDWRPRFGRFSVEIMSEGNVENLYFQS
SUSP1 Vipr protein G 202 Suspvirus Susp1 , Synthetic Construct MKLLNIKITGTRPFLSHADTLSDPLNPLTKYHKSLSSKRKKTDEDYALLAESQLVTSCYYDEQLGFVMNGEMIEACIKSGAKLNKLGKVIDRAIMLTDVVFPMTIKNCPANPQELAKNQDFIYAKSVKIGTARVMSYRPIFRDWSVEFGLMFDEEQITKEELLMVLENAGNLCGVGDWRPRFGRFSVEIMSEGNVENLYFQS
SUSP1 Vipr protein H 202 Suspvirus Susp1 , Synthetic Construct MKLLNIKITGTRPFLSHADTLSDPLNPLTKYHKSLSSKRKKTDEDYALLAESQLVTSCYYDEQLGFVMNGEMIEACIKSGAKLNKLGKVIDRAIMLTDVVFPMTIKNCPANPQELAKNQDFIYAKSVKIGTARVMSYRPIFRDWSVEFGLMFDEEQITKEELLMVLENAGNLCGVGDWRPRFGRFSVEIMSEGNVENLYFQS
SUSP1 Vipr protein I 202 Suspvirus Susp1 , Synthetic Construct MKLLNIKITGTRPFLSHADTLSDPLNPLTKYHKSLSSKRKKTDEDYALLAESQLVTSCYYDEQLGFVMNGEMIEACIKSGAKLNKLGKVIDRAIMLTDVVFPMTIKNCPANPQELAKNQDFIYAKSVKIGTARVMSYRPIFRDWSVEFGLMFDEEQITKEELLMVLENAGNLCGVGDWRPRFGRFSVEIMSEGNVENLYFQS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2026-06-24
Deposition Author(s): Brohawn, S.G. , Docter, T.A. , Doudna, J.A. , Yoon, P.H. , Zhang, Z.