Cryoem structure of a catalytically inactive cxc chemokine-degrading protease spycep from streptococcus pyogenes complexed with an anti-pa-domain monoclonal antibody
PDB DOI: 10.2210/pdb31mr/pdb
Classification: PROTEIN BINDING Organism(s): Mus Musculus , Streptococcus Pyogenes
Deposited: 2026-06-12 Deposition Author(s): Barritt, J.D. , Huemer, C.B. , Lau, R.J. , Matthews, S. , Wu, G.H.Y.
Cryoem structure of a catalytically inactive cxc chemokine-degrading protease spycep from streptococcus pyogenes complexed with an anti-pa-domain monoclonal antibody
Barritt, J.D. , Huemer, C.B. , Lau, R.J. , Matthews, S. , Wu, G.H.Y.
Primary Citation of Related Structures: 31MR
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Cell envelope proteinase A | A | 221 | Mus Musculus , Streptococcus Pyogenes | MGSSHHHHHHADELSTMSEPTITNHAQQQAQHLTNTELSSAESKSQDTSQITLKTNREKEQSQDLVSEPTTTELADTDAASMANTGSDATQKSASLPPVNTDVHDWVKTKGAWDKGYKGQGKVVAVIATGIDPAHQSMRISDVSTAKVKSKEDMLARQKAAGINYGSWINDKVVFAHNYVENSDNIKENQFEDFDEDWENFEFDAEAEPKAIKKHKIYRPQ |
| Cell envelope proteinase A | B | 1346 | Mus Musculus , Streptococcus Pyogenes | MGSSSTQAPKETVIKTEETDGSHDIDWTQTDDDTKYESHGMHVTGIVAGNSKEAAATGERFLGIAPEAQVMFMRVFANDIMGSAESLFIKAIEDAVALGADVINLSLGTANGAQLSGSKPLMEAIEKAKKAGVSVVVAAGNERVYGSDHDDPLATNPDYGLVGSPSTGRTPTSVAAINSKWVIQRLMTVKELENRADLNHGKAIYSESVDFKDIKDSLGYDKSHQFAYVKESTDAGYNAQDVKGKIALIERDPNKTYDEMIALAKKHGALGVLIFNNKPGQSNRSMRLTANGMGIPSAFISHEFGKAMSQLNGNGTGSLEFDSVVSKAPSQKGNEMNHFSNWGLTSDGYLKPDITAPGGDIYSTYNDNHYGSQTGTAMASPQIAGASLLVKQYLEKTQPNLPKEKIADIVKNLLMSNAQIHVNPETKTTTSPRQQGAGLLNIDGAVTSGLYVTGKDNYGSISLGNITDTMTFDVTVHNLSNKDKTLRYDTELLTDHVDPQKGRFTLTSHSLKTYQGGEVTVPANGKVTVRVTMDVSQFTKELTKQMPNGYYLEGFVRFRDSQDDQLNRVNIPFVGFKGQFENLAVAEESIYRLKSQGKTGFYFDESGPKDDIYVGKHFTGLVTLGSETNVSTKTISDNGLHTLGTFKNADGKFILEKNAQGNPVLAISPNGDNNQNFAAFKGVFLRKYQGLKASVYHASDKEHKNPLWVSPESFKGDKNFNSDIRFAKSTTLLGTAFSGKSLTGAELPDGHYHYVVSYYPDVVGAKRQEMTFDMILDRQKPVLSQATFDPETNRFKPEPLKDRGLAGVRKDSAFYLERKDNKPYTVTINDSYKYVSVEDNKTFVERQADGSFILPLDKAKLGDFYYMVEDFAGNVAIAKLGDHLPQTLGKTPIKLKLTDGNYQTKETLKDNLEMTQSDTGLVTNQAQLAVVHRNQPQSQLTKMNQDFFISPNEDGNKDFVAFKGLKNNVYNDLTVNVYAKDDHQKQTPIWSSQAGASVSAIESTAWYGITARGSKVMPGDYQYVVTYRDEHGKEHQKQYTISVNDKKPMITQGRFDTINGVDHFTPDKTKALGSSGIVREEVFYLAKKNGRKFDVTEGKDGITVSDNKVYIPKNPDGSYTISKRDGVTLSDYYYLVEDRAGNVSFATLRDLKAVGKDKAVVNFGLDLPVPEDKQIVNFTYLVRDADGKPIENLEYYNNSGNSLILPYGKYTVELLTYDTNAAKLESDKIVSFTLSADNNFQQVTFKITMLATSQITAHFDHLLPEGSRVSLKTAQDQLIPLEQSLYVPKAYGKTVQEGTYEVVVSLPKGYRIEGNTKVNTLPNEVHELSLRLVKVGDALEHHHHHH |
| Anti-PA-domain monoclonal antibody (3F2G10) Heavy chain variable region | H | 122 | Mus Musculus , Streptococcus Pyogenes | EVRLVESGGGLVKPGGSLKLSCAASGFTLNSYAMSWVRQTPEKRLEWVASISRGGSTFYPDDVRGRFTFSRDNARNILYLQMSSLRSEDTAMYYCARGILGNYGIFGAIDNWGQGTSVTVSS |
| Anti-PA-domain monoclonal antibody (3F2G10) Light chain variable region | L | 113 | Mus Musculus , Streptococcus Pyogenes | DIVMTQSPSSLAMSVGQKVTMSCKSSQNLLNSSNQKNYLAWYQQKPGQSPKLLVFFASSRESGVPDRFIGSGSGTDFTLTISSVQAEDLADYFCQQHSSIPFTFGSGTKLEMK |
Method: ELECTRON MICROSCOPY
Deposited Date: 2026-06-12 Deposition Author(s): Barritt, J.D. , Huemer, C.B. , Lau, R.J. , Matthews, S. , Wu, G.H.Y.