PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

2ZUF

Crystal structure of pyrococcus horikoshii arginyl-trna synthetase complexed with trna(arg)

PDB DOI: 10.2210/pdb2zuf/pdb

Classification: Ligase/RNA
Organism(s): Prochlorococcus Phage P-Scsp1U , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2008-10-16
Deposition Author(s): Konno, M. , Mori, Y. , Sekine, S. , Sumida, T. , Uchikawa, E. , Yanagisawa, T. , Yokoyama, S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.3 Å

2zuf
Literature

Crystal structure of pyrococcus horikoshii arginyl-trna synthetase complexed with trna(arg)

Konno, M. , Mori, Y. , Sekine, S. , Sumida, T. , Uchikawa, E. , Yanagisawa, T. , Yokoyama, S.

Primary Citation of Related Structures: 2ZUF


Proteins
Molecule Chains Sequence Length Organism Sequence
Arginyl-tRNA synthetase A 629 Prochlorococcus Phage P-Scsp1U , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MLMEIRESVKERIEEIIKEIAPQWEGEIELKETPDPKLGDFGTPIAFKLAKLLKRPPIEIAEKIVEKLKLNLPEGIKDVKAVNGYINVFIDYPHFARILINDILAKGDRFGSSEIGKGKKVIVEHTSVNPTKPLHMGHARNAILGDVMARILRFLGYEVEVQNYIDDLGIQFAQVYWGYLRLKEEFERIMNELRERGLKDNPIDHALGLLYVEVNRRLEDNPELENEIRDIMKKLESGELYGRKLAEEVVRAQMVTTYKLGVKYDLLVWESDIVRRKLFEIALELLSKNENFYIPSDGKYRGAFVMDLRKLFPDMKNPILVLRRSDGTATYTGKDIAYHLWKFGKIDVDLLYKEWDSTTWTTAPDGKSMPNKFGNANIVINVIGAEQKHPQLAIKYALQLLGFEDAAANLYHLAYEHVERPEGKFSGRKGTWVGFTVDEVIQEAVKRARELIEEKNPALSDEEKAEVAEKVGIGAIRYNLIKYSPDKKIIFRWEDVLNFEGESAPYIQYAHARCSSILRKAEEEGIKVDPETLFKNADFTKLSERERELVIMLSKFPRIVEQAGKDVKPHLIAWFANELASLFNKFYMDHPVLKAEEGVREARLLLVMAVEQVLKNALYLMGIEAPERM

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
tRNA-Arg b 78 NA GGACCGGUAGCCUAGCCAGGACAGGGCGGCGGCCUCCUAAGCCGCAGGUCCGGGGUUCAAAUCCCCGCCGGUCCGCCA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2008-10-16
Deposition Author(s): Konno, M. , Mori, Y. , Sekine, S. , Sumida, T. , Uchikawa, E. , Yanagisawa, T. , Yokoyama, S.