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FASTA Sequence PDB Format mmCIF Format
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2ZL2

Crystal structure of h.pylori clpp in complex with the peptide nvlgftq

PDB DOI: 10.2210/pdb2zl2/pdb

Classification: HYDROLASE
Organism(s): Helicobacter Pylori , Synthetic Construct

Deposited: 2008-04-02
Deposition Author(s): Kim, D.Y. , Kim, K.K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.5 Å

2zl2
Literature

Crystal structure of h.pylori clpp in complex with the peptide nvlgftq

Kim, D.Y. , Kim, K.K.

Primary Citation of Related Structures: 2ZL2


Proteins
Molecule Chains Sequence Length Organism Sequence
ATP-dependent Clp protease proteolytic subunit A 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
ATP-dependent Clp protease proteolytic subunit B 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
ATP-dependent Clp protease proteolytic subunit C 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
ATP-dependent Clp protease proteolytic subunit D 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
ATP-dependent Clp protease proteolytic subunit E 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
ATP-dependent Clp protease proteolytic subunit F 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
ATP-dependent Clp protease proteolytic subunit G 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
ATP-dependent Clp protease proteolytic subunit H 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
ATP-dependent Clp protease proteolytic subunit I 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
ATP-dependent Clp protease proteolytic subunit J 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
ATP-dependent Clp protease proteolytic subunit K 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
ATP-dependent Clp protease proteolytic subunit L 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
ATP-dependent Clp protease proteolytic subunit M 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
ATP-dependent Clp protease proteolytic subunit N 196 Helicobacter Pylori , Synthetic Construct MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
A peptide substrate-NVLGFTQ O 7 Helicobacter Pylori , Synthetic Construct NVLGFTQ
A peptide substrate-NVLGFTQ P 7 Helicobacter Pylori , Synthetic Construct NVLGFTQ
A peptide substrate-NVLGFTQ Q 7 Helicobacter Pylori , Synthetic Construct NVLGFTQ
A peptide substrate-NVLGFTQ T 7 Helicobacter Pylori , Synthetic Construct NVLGFTQ
A peptide substrate-NVLGFTQ U 7 Helicobacter Pylori , Synthetic Construct NVLGFTQ
A peptide substrate-NVLGFTQ V 7 Helicobacter Pylori , Synthetic Construct NVLGFTQ
A peptide substrate-NVLGFTQ W 7 Helicobacter Pylori , Synthetic Construct NVLGFTQ
A peptide substrate-NVLGFTQ X 7 Helicobacter Pylori , Synthetic Construct NVLGFTQ
A peptide substrate-NVLGFTQ for Chain R and S R 7 Helicobacter Pylori , Synthetic Construct XXXXXXX
A peptide substrate-NVLGFTQ for Chain R and S S 7 Helicobacter Pylori , Synthetic Construct XXXXXXX
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2008-04-02
Deposition Author(s): Kim, D.Y. , Kim, K.K.