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FASTA Sequence PDB Format mmCIF Format
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2YEW

Modeling barmah forest virus structural proteins

PDB DOI: 10.2210/pdb2yew/pdb

Classification: VIRUS
Organism(s): Barmah Forest Virus

Deposited: 2011-03-31
Deposition Author(s): Aung, M. , Chiu, W. , Haddow, A.D. , Jakana, J. , Kostyuchenko, V.A. , Liu, X. , Lok, S.M. , Weaver, S.C.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 5.0 Å

Literature

Modeling barmah forest virus structural proteins

Aung, M. , Chiu, W. , Haddow, A.D. , Jakana, J. , Kostyuchenko, V.A. , Liu, X. , Lok, S.M. , Weaver, S.C.

Primary Citation of Related Structures: 2YEW


Proteins
Molecule Chains Sequence Length Organism Sequence
CAPSID PROTEIN A 253 Barmah Forest Virus MDFIPTQTFYGRRWRPAPVQRYIPQPQPPAPPRRRRGPSQLQQLVAALGALALQPKQKQKRAQKKPKKTPPPKPKKTQKPKKPTQKKKSKPGKRMRNCMKIENDCIFPVMLDGKVNGYACLVGDKVMKPAHVKGTIDNPELAKLTFKKSSKYDLECAQVPVCMKSDASKFTHEKPEGHYNWHHGAVQFSNGRFTIPTGSGKPGDSGRPIFDNTGKVVAIVLGGANEGARTALSVVTWNKDMVTRITPEESVEW
CAPSID PROTEIN D 253 Barmah Forest Virus MDFIPTQTFYGRRWRPAPVQRYIPQPQPPAPPRRRRGPSQLQQLVAALGALALQPKQKQKRAQKKPKKTPPPKPKKTQKPKKPTQKKKSKPGKRMRNCMKIENDCIFPVMLDGKVNGYACLVGDKVMKPAHVKGTIDNPELAKLTFKKSSKYDLECAQVPVCMKSDASKFTHEKPEGHYNWHHGAVQFSNGRFTIPTGSGKPGDSGRPIFDNTGKVVAIVLGGANEGARTALSVVTWNKDMVTRITPEESVEW
CAPSID PROTEIN G 253 Barmah Forest Virus MDFIPTQTFYGRRWRPAPVQRYIPQPQPPAPPRRRRGPSQLQQLVAALGALALQPKQKQKRAQKKPKKTPPPKPKKTQKPKKPTQKKKSKPGKRMRNCMKIENDCIFPVMLDGKVNGYACLVGDKVMKPAHVKGTIDNPELAKLTFKKSSKYDLECAQVPVCMKSDASKFTHEKPEGHYNWHHGAVQFSNGRFTIPTGSGKPGDSGRPIFDNTGKVVAIVLGGANEGARTALSVVTWNKDMVTRITPEESVEW
CAPSID PROTEIN J 253 Barmah Forest Virus MDFIPTQTFYGRRWRPAPVQRYIPQPQPPAPPRRRRGPSQLQQLVAALGALALQPKQKQKRAQKKPKKTPPPKPKKTQKPKKPTQKKKSKPGKRMRNCMKIENDCIFPVMLDGKVNGYACLVGDKVMKPAHVKGTIDNPELAKLTFKKSSKYDLECAQVPVCMKSDASKFTHEKPEGHYNWHHGAVQFSNGRFTIPTGSGKPGDSGRPIFDNTGKVVAIVLGGANEGARTALSVVTWNKDMVTRITPEESVEW
E1 ENVELOPE GLYCOPROTEIN B 427 Barmah Forest Virus YESTTMPNQVGIPFKALIERPGYAGLPLSLVVIKSELVPSLVQDYITCNYKTVVPSPYIKCCGGAECSKNEADYKCSVFTGVYPFMWGGAYCFCDTENSQMSEVYVTRGESCEADAIAYQVTASLKAQVMISIGELNQTVDVFVNGDSPARIQQSKFILGPISSAWSPFDKVIVYRDEVYNEDYAPYGSGQAGRFGDIQSRTVNSTDVYANTNLKLKRPASGNVHVPYTQTPSGFSYWKKEKGVPLNRNAPFGCIIKVNPVRAENCVYGNIPISMDIADAFTRIDESPSVSLKACEVQSCTYSSDFGGVASISYTSNKVGKCAISSNSATMKDSVQDVQESGALSLFFATSSVEPNFVVQVCNARITCGKCEPPKDIVPYAAKNDAEFPSISTTAWQWLATTSGPLTILVVAIIVVVVVSIVVCARH
E1 ENVELOPE GLYCOPROTEIN E 427 Barmah Forest Virus YESTTMPNQVGIPFKALIERPGYAGLPLSLVVIKSELVPSLVQDYITCNYKTVVPSPYIKCCGGAECSKNEADYKCSVFTGVYPFMWGGAYCFCDTENSQMSEVYVTRGESCEADAIAYQVTASLKAQVMISIGELNQTVDVFVNGDSPARIQQSKFILGPISSAWSPFDKVIVYRDEVYNEDYAPYGSGQAGRFGDIQSRTVNSTDVYANTNLKLKRPASGNVHVPYTQTPSGFSYWKKEKGVPLNRNAPFGCIIKVNPVRAENCVYGNIPISMDIADAFTRIDESPSVSLKACEVQSCTYSSDFGGVASISYTSNKVGKCAISSNSATMKDSVQDVQESGALSLFFATSSVEPNFVVQVCNARITCGKCEPPKDIVPYAAKNDAEFPSISTTAWQWLATTSGPLTILVVAIIVVVVVSIVVCARH
E1 ENVELOPE GLYCOPROTEIN H 427 Barmah Forest Virus YESTTMPNQVGIPFKALIERPGYAGLPLSLVVIKSELVPSLVQDYITCNYKTVVPSPYIKCCGGAECSKNEADYKCSVFTGVYPFMWGGAYCFCDTENSQMSEVYVTRGESCEADAIAYQVTASLKAQVMISIGELNQTVDVFVNGDSPARIQQSKFILGPISSAWSPFDKVIVYRDEVYNEDYAPYGSGQAGRFGDIQSRTVNSTDVYANTNLKLKRPASGNVHVPYTQTPSGFSYWKKEKGVPLNRNAPFGCIIKVNPVRAENCVYGNIPISMDIADAFTRIDESPSVSLKACEVQSCTYSSDFGGVASISYTSNKVGKCAISSNSATMKDSVQDVQESGALSLFFATSSVEPNFVVQVCNARITCGKCEPPKDIVPYAAKNDAEFPSISTTAWQWLATTSGPLTILVVAIIVVVVVSIVVCARH
E1 ENVELOPE GLYCOPROTEIN K 427 Barmah Forest Virus YESTTMPNQVGIPFKALIERPGYAGLPLSLVVIKSELVPSLVQDYITCNYKTVVPSPYIKCCGGAECSKNEADYKCSVFTGVYPFMWGGAYCFCDTENSQMSEVYVTRGESCEADAIAYQVTASLKAQVMISIGELNQTVDVFVNGDSPARIQQSKFILGPISSAWSPFDKVIVYRDEVYNEDYAPYGSGQAGRFGDIQSRTVNSTDVYANTNLKLKRPASGNVHVPYTQTPSGFSYWKKEKGVPLNRNAPFGCIIKVNPVRAENCVYGNIPISMDIADAFTRIDESPSVSLKACEVQSCTYSSDFGGVASISYTSNKVGKCAISSNSATMKDSVQDVQESGALSLFFATSSVEPNFVVQVCNARITCGKCEPPKDIVPYAAKNDAEFPSISTTAWQWLATTSGPLTILVVAIIVVVVVSIVVCARH
E2 ENVELOPE GLYCOPROTEIN C 421 Barmah Forest Virus SVAHFEAYKATRPYIGWCADCGLAGSCPSPVSIEHVWSDADDGVLKIQVSMQIGIAKSNTINHAKIRYMGANGVQEAERSTLSVSTTAPCDILATMGHFILARCRPGSQVEVSLSTDPKLLCRTPFSHKPRFIGNEKSPAPTGHKTRIPCKTYSHQTDLTREEITMHVPPDVPIQGLVSNTGKSYSLDPKTKTIKYKCTCGETVKEGTATNKITLFNCDTAPKCITYAVDNTVWQYNSQYVPRSEVTEVKGKIHVPFPLTDSTCAVSVAPEPQVTYRLGEVEFHFHPMYPTLFSIRSLGKDPSHSQEWIDTPMSKTIQVGAEGVEYVWGNNNPVRLWAQKSSSSSAHGNPISIVSHYYDLYPYWTITVLASLGLLIVISSGFSCFLCSVARTKCLTPYQLAPGAQLPTFIALLCCAKSARA
E2 ENVELOPE GLYCOPROTEIN F 421 Barmah Forest Virus SVAHFEAYKATRPYIGWCADCGLAGSCPSPVSIEHVWSDADDGVLKIQVSMQIGIAKSNTINHAKIRYMGANGVQEAERSTLSVSTTAPCDILATMGHFILARCRPGSQVEVSLSTDPKLLCRTPFSHKPRFIGNEKSPAPTGHKTRIPCKTYSHQTDLTREEITMHVPPDVPIQGLVSNTGKSYSLDPKTKTIKYKCTCGETVKEGTATNKITLFNCDTAPKCITYAVDNTVWQYNSQYVPRSEVTEVKGKIHVPFPLTDSTCAVSVAPEPQVTYRLGEVEFHFHPMYPTLFSIRSLGKDPSHSQEWIDTPMSKTIQVGAEGVEYVWGNNNPVRLWAQKSSSSSAHGNPISIVSHYYDLYPYWTITVLASLGLLIVISSGFSCFLCSVARTKCLTPYQLAPGAQLPTFIALLCCAKSARA
E2 ENVELOPE GLYCOPROTEIN I 421 Barmah Forest Virus SVAHFEAYKATRPYIGWCADCGLAGSCPSPVSIEHVWSDADDGVLKIQVSMQIGIAKSNTINHAKIRYMGANGVQEAERSTLSVSTTAPCDILATMGHFILARCRPGSQVEVSLSTDPKLLCRTPFSHKPRFIGNEKSPAPTGHKTRIPCKTYSHQTDLTREEITMHVPPDVPIQGLVSNTGKSYSLDPKTKTIKYKCTCGETVKEGTATNKITLFNCDTAPKCITYAVDNTVWQYNSQYVPRSEVTEVKGKIHVPFPLTDSTCAVSVAPEPQVTYRLGEVEFHFHPMYPTLFSIRSLGKDPSHSQEWIDTPMSKTIQVGAEGVEYVWGNNNPVRLWAQKSSSSSAHGNPISIVSHYYDLYPYWTITVLASLGLLIVISSGFSCFLCSVARTKCLTPYQLAPGAQLPTFIALLCCAKSARA
E2 ENVELOPE GLYCOPROTEIN L 421 Barmah Forest Virus SVAHFEAYKATRPYIGWCADCGLAGSCPSPVSIEHVWSDADDGVLKIQVSMQIGIAKSNTINHAKIRYMGANGVQEAERSTLSVSTTAPCDILATMGHFILARCRPGSQVEVSLSTDPKLLCRTPFSHKPRFIGNEKSPAPTGHKTRIPCKTYSHQTDLTREEITMHVPPDVPIQGLVSNTGKSYSLDPKTKTIKYKCTCGETVKEGTATNKITLFNCDTAPKCITYAVDNTVWQYNSQYVPRSEVTEVKGKIHVPFPLTDSTCAVSVAPEPQVTYRLGEVEFHFHPMYPTLFSIRSLGKDPSHSQEWIDTPMSKTIQVGAEGVEYVWGNNNPVRLWAQKSSSSSAHGNPISIVSHYYDLYPYWTITVLASLGLLIVISSGFSCFLCSVARTKCLTPYQLAPGAQLPTFIALLCCAKSARA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2011-03-31
Deposition Author(s): Aung, M. , Chiu, W. , Haddow, A.D. , Jakana, J. , Kostyuchenko, V.A. , Liu, X. , Lok, S.M. , Weaver, S.C.