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2YEW
Modeling barmah forest virus structural proteins
PDB DOI: 10.2210/pdb2yew/pdb
Classification: VIRUS Organism(s): Micromonospora Zionensis
Deposited: 2011-03-31 Deposition Author(s): Aung, M. , Chiu, W. , Haddow, A.D. , Jakana, J. , Kostyuchenko, V.A. , Liu, X. , Lok, S.M. , Weaver, S.C.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 5.0 Å
Modeling barmah forest virus structural proteins
Aung, M. , Chiu, W. , Haddow, A.D. , Jakana, J. , Kostyuchenko, V.A. , Liu, X. , Lok, S.M. , Weaver, S.C.
Primary Citation of Related Structures: 2YEW
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| CAPSID PROTEIN | A | 253 | Micromonospora Zionensis | MDFIPTQTFYGRRWRPAPVQRYIPQPQPPAPPRRRRGPSQLQQLVAALGALALQPKQKQKRAQKKPKKTPPPKPKKTQKPKKPTQKKKSKPGKRMRNCMKIENDCIFPVMLDGKVNGYACLVGDKVMKPAHVKGTIDNPELAKLTFKKSSKYDLECAQVPVCMKSDASKFTHEKPEGHYNWHHGAVQFSNGRFTIPTGSGKPGDSGRPIFDNTGKVVAIVLGGANEGARTALSVVTWNKDMVTRITPEESVEW |
| CAPSID PROTEIN | D | 253 | Micromonospora Zionensis | MDFIPTQTFYGRRWRPAPVQRYIPQPQPPAPPRRRRGPSQLQQLVAALGALALQPKQKQKRAQKKPKKTPPPKPKKTQKPKKPTQKKKSKPGKRMRNCMKIENDCIFPVMLDGKVNGYACLVGDKVMKPAHVKGTIDNPELAKLTFKKSSKYDLECAQVPVCMKSDASKFTHEKPEGHYNWHHGAVQFSNGRFTIPTGSGKPGDSGRPIFDNTGKVVAIVLGGANEGARTALSVVTWNKDMVTRITPEESVEW |
| CAPSID PROTEIN | G | 253 | Micromonospora Zionensis | MDFIPTQTFYGRRWRPAPVQRYIPQPQPPAPPRRRRGPSQLQQLVAALGALALQPKQKQKRAQKKPKKTPPPKPKKTQKPKKPTQKKKSKPGKRMRNCMKIENDCIFPVMLDGKVNGYACLVGDKVMKPAHVKGTIDNPELAKLTFKKSSKYDLECAQVPVCMKSDASKFTHEKPEGHYNWHHGAVQFSNGRFTIPTGSGKPGDSGRPIFDNTGKVVAIVLGGANEGARTALSVVTWNKDMVTRITPEESVEW |
| CAPSID PROTEIN | J | 253 | Micromonospora Zionensis | MDFIPTQTFYGRRWRPAPVQRYIPQPQPPAPPRRRRGPSQLQQLVAALGALALQPKQKQKRAQKKPKKTPPPKPKKTQKPKKPTQKKKSKPGKRMRNCMKIENDCIFPVMLDGKVNGYACLVGDKVMKPAHVKGTIDNPELAKLTFKKSSKYDLECAQVPVCMKSDASKFTHEKPEGHYNWHHGAVQFSNGRFTIPTGSGKPGDSGRPIFDNTGKVVAIVLGGANEGARTALSVVTWNKDMVTRITPEESVEW |
| E1 ENVELOPE GLYCOPROTEIN | B | 427 | Micromonospora Zionensis | YESTTMPNQVGIPFKALIERPGYAGLPLSLVVIKSELVPSLVQDYITCNYKTVVPSPYIKCCGGAECSKNEADYKCSVFTGVYPFMWGGAYCFCDTENSQMSEVYVTRGESCEADAIAYQVTASLKAQVMISIGELNQTVDVFVNGDSPARIQQSKFILGPISSAWSPFDKVIVYRDEVYNEDYAPYGSGQAGRFGDIQSRTVNSTDVYANTNLKLKRPASGNVHVPYTQTPSGFSYWKKEKGVPLNRNAPFGCIIKVNPVRAENCVYGNIPISMDIADAFTRIDESPSVSLKACEVQSCTYSSDFGGVASISYTSNKVGKCAISSNSATMKDSVQDVQESGALSLFFATSSVEPNFVVQVCNARITCGKCEPPKDIVPYAAKNDAEFPSISTTAWQWLATTSGPLTILVVAIIVVVVVSIVVCARH |
| E1 ENVELOPE GLYCOPROTEIN | E | 427 | Micromonospora Zionensis | YESTTMPNQVGIPFKALIERPGYAGLPLSLVVIKSELVPSLVQDYITCNYKTVVPSPYIKCCGGAECSKNEADYKCSVFTGVYPFMWGGAYCFCDTENSQMSEVYVTRGESCEADAIAYQVTASLKAQVMISIGELNQTVDVFVNGDSPARIQQSKFILGPISSAWSPFDKVIVYRDEVYNEDYAPYGSGQAGRFGDIQSRTVNSTDVYANTNLKLKRPASGNVHVPYTQTPSGFSYWKKEKGVPLNRNAPFGCIIKVNPVRAENCVYGNIPISMDIADAFTRIDESPSVSLKACEVQSCTYSSDFGGVASISYTSNKVGKCAISSNSATMKDSVQDVQESGALSLFFATSSVEPNFVVQVCNARITCGKCEPPKDIVPYAAKNDAEFPSISTTAWQWLATTSGPLTILVVAIIVVVVVSIVVCARH |
| E1 ENVELOPE GLYCOPROTEIN | H | 427 | Micromonospora Zionensis | YESTTMPNQVGIPFKALIERPGYAGLPLSLVVIKSELVPSLVQDYITCNYKTVVPSPYIKCCGGAECSKNEADYKCSVFTGVYPFMWGGAYCFCDTENSQMSEVYVTRGESCEADAIAYQVTASLKAQVMISIGELNQTVDVFVNGDSPARIQQSKFILGPISSAWSPFDKVIVYRDEVYNEDYAPYGSGQAGRFGDIQSRTVNSTDVYANTNLKLKRPASGNVHVPYTQTPSGFSYWKKEKGVPLNRNAPFGCIIKVNPVRAENCVYGNIPISMDIADAFTRIDESPSVSLKACEVQSCTYSSDFGGVASISYTSNKVGKCAISSNSATMKDSVQDVQESGALSLFFATSSVEPNFVVQVCNARITCGKCEPPKDIVPYAAKNDAEFPSISTTAWQWLATTSGPLTILVVAIIVVVVVSIVVCARH |
| E1 ENVELOPE GLYCOPROTEIN | K | 427 | Micromonospora Zionensis | YESTTMPNQVGIPFKALIERPGYAGLPLSLVVIKSELVPSLVQDYITCNYKTVVPSPYIKCCGGAECSKNEADYKCSVFTGVYPFMWGGAYCFCDTENSQMSEVYVTRGESCEADAIAYQVTASLKAQVMISIGELNQTVDVFVNGDSPARIQQSKFILGPISSAWSPFDKVIVYRDEVYNEDYAPYGSGQAGRFGDIQSRTVNSTDVYANTNLKLKRPASGNVHVPYTQTPSGFSYWKKEKGVPLNRNAPFGCIIKVNPVRAENCVYGNIPISMDIADAFTRIDESPSVSLKACEVQSCTYSSDFGGVASISYTSNKVGKCAISSNSATMKDSVQDVQESGALSLFFATSSVEPNFVVQVCNARITCGKCEPPKDIVPYAAKNDAEFPSISTTAWQWLATTSGPLTILVVAIIVVVVVSIVVCARH |
| E2 ENVELOPE GLYCOPROTEIN | C | 421 | Micromonospora Zionensis | SVAHFEAYKATRPYIGWCADCGLAGSCPSPVSIEHVWSDADDGVLKIQVSMQIGIAKSNTINHAKIRYMGANGVQEAERSTLSVSTTAPCDILATMGHFILARCRPGSQVEVSLSTDPKLLCRTPFSHKPRFIGNEKSPAPTGHKTRIPCKTYSHQTDLTREEITMHVPPDVPIQGLVSNTGKSYSLDPKTKTIKYKCTCGETVKEGTATNKITLFNCDTAPKCITYAVDNTVWQYNSQYVPRSEVTEVKGKIHVPFPLTDSTCAVSVAPEPQVTYRLGEVEFHFHPMYPTLFSIRSLGKDPSHSQEWIDTPMSKTIQVGAEGVEYVWGNNNPVRLWAQKSSSSSAHGNPISIVSHYYDLYPYWTITVLASLGLLIVISSGFSCFLCSVARTKCLTPYQLAPGAQLPTFIALLCCAKSARA |
| E2 ENVELOPE GLYCOPROTEIN | F | 421 | Micromonospora Zionensis | SVAHFEAYKATRPYIGWCADCGLAGSCPSPVSIEHVWSDADDGVLKIQVSMQIGIAKSNTINHAKIRYMGANGVQEAERSTLSVSTTAPCDILATMGHFILARCRPGSQVEVSLSTDPKLLCRTPFSHKPRFIGNEKSPAPTGHKTRIPCKTYSHQTDLTREEITMHVPPDVPIQGLVSNTGKSYSLDPKTKTIKYKCTCGETVKEGTATNKITLFNCDTAPKCITYAVDNTVWQYNSQYVPRSEVTEVKGKIHVPFPLTDSTCAVSVAPEPQVTYRLGEVEFHFHPMYPTLFSIRSLGKDPSHSQEWIDTPMSKTIQVGAEGVEYVWGNNNPVRLWAQKSSSSSAHGNPISIVSHYYDLYPYWTITVLASLGLLIVISSGFSCFLCSVARTKCLTPYQLAPGAQLPTFIALLCCAKSARA |
| E2 ENVELOPE GLYCOPROTEIN | I | 421 | Micromonospora Zionensis | SVAHFEAYKATRPYIGWCADCGLAGSCPSPVSIEHVWSDADDGVLKIQVSMQIGIAKSNTINHAKIRYMGANGVQEAERSTLSVSTTAPCDILATMGHFILARCRPGSQVEVSLSTDPKLLCRTPFSHKPRFIGNEKSPAPTGHKTRIPCKTYSHQTDLTREEITMHVPPDVPIQGLVSNTGKSYSLDPKTKTIKYKCTCGETVKEGTATNKITLFNCDTAPKCITYAVDNTVWQYNSQYVPRSEVTEVKGKIHVPFPLTDSTCAVSVAPEPQVTYRLGEVEFHFHPMYPTLFSIRSLGKDPSHSQEWIDTPMSKTIQVGAEGVEYVWGNNNPVRLWAQKSSSSSAHGNPISIVSHYYDLYPYWTITVLASLGLLIVISSGFSCFLCSVARTKCLTPYQLAPGAQLPTFIALLCCAKSARA |
| E2 ENVELOPE GLYCOPROTEIN | L | 421 | Micromonospora Zionensis | SVAHFEAYKATRPYIGWCADCGLAGSCPSPVSIEHVWSDADDGVLKIQVSMQIGIAKSNTINHAKIRYMGANGVQEAERSTLSVSTTAPCDILATMGHFILARCRPGSQVEVSLSTDPKLLCRTPFSHKPRFIGNEKSPAPTGHKTRIPCKTYSHQTDLTREEITMHVPPDVPIQGLVSNTGKSYSLDPKTKTIKYKCTCGETVKEGTATNKITLFNCDTAPKCITYAVDNTVWQYNSQYVPRSEVTEVKGKIHVPFPLTDSTCAVSVAPEPQVTYRLGEVEFHFHPMYPTLFSIRSLGKDPSHSQEWIDTPMSKTIQVGAEGVEYVWGNNNPVRLWAQKSSSSSAHGNPISIVSHYYDLYPYWTITVLASLGLLIVISSGFSCFLCSVARTKCLTPYQLAPGAQLPTFIALLCCAKSARA |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2011-03-31 Deposition Author(s): Aung, M. , Chiu, W. , Haddow, A.D. , Jakana, J. , Kostyuchenko, V.A. , Liu, X. , Lok, S.M. , Weaver, S.C.