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2Y5T
Crystal structure of the pathogenic autoantibody ciic1 in complex with the triple-helical c1 peptide
PDB DOI: 10.2210/pdb2y5t/pdb
Classification: IMMUNE SYSTEM Organism(s): Mus Musculus , Synthetic Construct
Deposited: 2011-01-17 Deposition Author(s): Burkhardt, H. , Dobritzsch, D. , Holmdahl, R. , Lindh, I. , Nandakumar, K.S. , Schneider, G. , Schneider, N. , Uysal, H.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.2 Å
Crystal structure of the pathogenic autoantibody ciic1 in complex with the triple-helical c1 peptide
Burkhardt, H. , Dobritzsch, D. , Holmdahl, R. , Lindh, I. , Nandakumar, K.S. , Schneider, G. , Schneider, N. , Uysal, H.
Primary Citation of Related Structures: 2Y5T
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| CIIC1 FAB FRAGMENT HEAVY CHAIN | A | 232 | Mus Musculus , Synthetic Construct | QVQLQQPGADLVRPGVSVKLSCKASGYTFTSYWMNWVKQRPGQGLEWIGMIHPSDSETRLSQKFKDKATLTVDKSSSTAYMQLSSPTSEDSAVYYCARLKPGGTWFAYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCP |
| CIIC1 FAB FRAGMENT LIGHT CHAIN | B | 218 | Mus Musculus , Synthetic Construct | DIVLTQSPASLTVSLGQRATISCRASKSVDSYGNSFMEWYQQKPGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYYCQQSNEDPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC |
| C1 | E | 34 | Mus Musculus , Synthetic Construct | GPPGPPGPPGPPGPPGARGLTGRPGDAGPPGPPG |
| C1 | G | 34 | Mus Musculus , Synthetic Construct | GPPGPPGPPGPPGPPGARGLTGRPGDAGPPGPPG |
| C1 | F | 38 | Mus Musculus , Synthetic Construct | GPPGPPGPPGPPGPPGARGLTGRPGDAGPPGPPGKKYG |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2011-01-17 Deposition Author(s): Burkhardt, H. , Dobritzsch, D. , Holmdahl, R. , Lindh, I. , Nandakumar, K.S. , Schneider, G. , Schneider, N. , Uysal, H.