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2XCT
The twinned 3.35a structure of s. aureus gyrase complex with ciprofloxacin and dna
PDB DOI: 10.2210/pdb2xct/pdb
Classification: ISOMERASE/DNA/ANTIBIOTIC Organism(s): Staphylococcus Aureus , Synthetic Construct
Deposited: 2010-04-25 Deposition Author(s): Bax, B.D. , Brown, K.K. , Chan, P. , Eggleston, D.S. , Fosberry, A. , Gentry, D.R. , Giordano, I. , Gorrec, F. , Gwynn, M.N. , Hann, M.M. , Hennessy, A. , Hibbs, M. , Huang, J. , Jones, E. , Jones, J. , Lewis, C.J. , May, E. , Pearson, N.D. , Shen, C. , Shillings, A. , Singh, O. , Spitzfaden, C. , Theobald, A. , Wohlkonig, A.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.35 Å
The twinned 3.35a structure of s. aureus gyrase complex with ciprofloxacin and dna
Bax, B.D. , Brown, K.K. , Chan, P. , Eggleston, D.S. , Fosberry, A. , Gentry, D.R. , Giordano, I. , Gorrec, F. , Gwynn, M.N. , Hann, M.M. , Hennessy, A. , Hibbs, M. , Huang, J. , Jones, E. , Jones, J. , Lewis, C.J. , May, E. , Pearson, N.D. , Shen, C. , Shillings, A. , Singh, O. , Spitzfaden, C. , Theobald, A. , Wohlkonig, A.
Primary Citation of Related Structures: 2XCT
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA GYRASE SUBUNIT B, DNA GYRASE SUBUNIT A | B | 692 | Staphylococcus Aureus , Synthetic Construct | MDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGDFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPTGYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLDFAELPQSRINERNITSEMRESFLDYAMSVIVARALPDVRDGLKPVHRRILYGLNEQGMTPDKSYKKSARIVGDVMGKYHPHGDSSIYEAMVRMAQDFSYRYPLVDGQGNFGSMDGDGAAAMRFTEARMTKITLELLRDINKDTIDFIDNYDGNEREPSVLPARFPNLLANGASGIAVGMATNIPPHNLTELINGVLSLSKNPDISIAELMEDIEGPDFPTAGLILGKSGIRRAYETGRGSIQMRSRAVIEERGGGRQRIVVTEIPFQVNKARMIEKIAELVRDKKIDGITDLRDETSLRTGVRVVIDVRKDANASVILNNLYKQTPLQTSFGVNMIALVNGRPKLINLKEALVHYLEHQKTVVRRRTQYNLRKAKDRAHILEGLRIALDHIDEIISTIRESDTDKVAMESLQQRFKLSEKQAQAILDMRLRRLTGLERDKIEAEYNELLNYISELETILADEEVLLQLVRDELTEIRDRFGDDRRTEIQLG |
| DNA GYRASE SUBUNIT B, DNA GYRASE SUBUNIT A | D | 692 | Staphylococcus Aureus , Synthetic Construct | MDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGDFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPTGYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLDFAELPQSRINERNITSEMRESFLDYAMSVIVARALPDVRDGLKPVHRRILYGLNEQGMTPDKSYKKSARIVGDVMGKYHPHGDSSIYEAMVRMAQDFSYRYPLVDGQGNFGSMDGDGAAAMRFTEARMTKITLELLRDINKDTIDFIDNYDGNEREPSVLPARFPNLLANGASGIAVGMATNIPPHNLTELINGVLSLSKNPDISIAELMEDIEGPDFPTAGLILGKSGIRRAYETGRGSIQMRSRAVIEERGGGRQRIVVTEIPFQVNKARMIEKIAELVRDKKIDGITDLRDETSLRTGVRVVIDVRKDANASVILNNLYKQTPLQTSFGVNMIALVNGRPKLINLKEALVHYLEHQKTVVRRRTQYNLRKAKDRAHILEGLRIALDHIDEIISTIRESDTDKVAMESLQQRFKLSEKQAQAILDMRLRRLTGLERDKIEAEYNELLNYISELETILADEEVLLQLVRDELTEIRDRFGDDRRTEIQLG |
| DNA GYRASE SUBUNIT B, DNA GYRASE SUBUNIT A | S | 692 | Staphylococcus Aureus , Synthetic Construct | MDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGDFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPTGYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLDFAELPQSRINERNITSEMRESFLDYAMSVIVARALPDVRDGLKPVHRRILYGLNEQGMTPDKSYKKSARIVGDVMGKYHPHGDSSIYEAMVRMAQDFSYRYPLVDGQGNFGSMDGDGAAAMRFTEARMTKITLELLRDINKDTIDFIDNYDGNEREPSVLPARFPNLLANGASGIAVGMATNIPPHNLTELINGVLSLSKNPDISIAELMEDIEGPDFPTAGLILGKSGIRRAYETGRGSIQMRSRAVIEERGGGRQRIVVTEIPFQVNKARMIEKIAELVRDKKIDGITDLRDETSLRTGVRVVIDVRKDANASVILNNLYKQTPLQTSFGVNMIALVNGRPKLINLKEALVHYLEHQKTVVRRRTQYNLRKAKDRAHILEGLRIALDHIDEIISTIRESDTDKVAMESLQQRFKLSEKQAQAILDMRLRRLTGLERDKIEAEYNELLNYISELETILADEEVLLQLVRDELTEIRDRFGDDRRTEIQLG |
| DNA GYRASE SUBUNIT B, DNA GYRASE SUBUNIT A | U | 692 | Staphylococcus Aureus , Synthetic Construct | MDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGDFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPTGYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLDFAELPQSRINERNITSEMRESFLDYAMSVIVARALPDVRDGLKPVHRRILYGLNEQGMTPDKSYKKSARIVGDVMGKYHPHGDSSIYEAMVRMAQDFSYRYPLVDGQGNFGSMDGDGAAAMRFTEARMTKITLELLRDINKDTIDFIDNYDGNEREPSVLPARFPNLLANGASGIAVGMATNIPPHNLTELINGVLSLSKNPDISIAELMEDIEGPDFPTAGLILGKSGIRRAYETGRGSIQMRSRAVIEERGGGRQRIVVTEIPFQVNKARMIEKIAELVRDKKIDGITDLRDETSLRTGVRVVIDVRKDANASVILNNLYKQTPLQTSFGVNMIALVNGRPKLINLKEALVHYLEHQKTVVRRRTQYNLRKAKDRAHILEGLRIALDHIDEIISTIRESDTDKVAMESLQQRFKLSEKQAQAILDMRLRRLTGLERDKIEAEYNELLNYISELETILADEEVLLQLVRDELTEIRDRFGDDRRTEIQLG |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(TP*GP*TP*GP*CP*GP*GP*T)-3' | e | 8 | NA | TGTGCGGT |
| 5'-D(TP*GP*TP*GP*CP*GP*GP*T)-3' | v | 8 | NA | TGTGCGGT |
| 5'-D(AP*GP*CP*CP*GP*TP*AP*G)-3' | f | 8 | NA | AGCCGTAG |
| 5'-D(AP*GP*CP*CP*GP*TP*AP*G)-3' | w | 8 | NA | AGCCGTAG |
| 5'-D(GP*TP*AP*CP*CP*CP*AP*CP*GP*GP*CP*T)-3' | g | 12 | NA | GTACCCACGGCT |
| 5'-D(GP*TP*AP*CP*CP*CP*AP*CP*GP*GP*CP*T)-3' | x | 12 | NA | GTACCCACGGCT |
| 5'-D(GP*TP*AP*CP*AP*CP*CP*GP*CP*AP*CP*A)-3' | h | 12 | NA | GTACACCGCACA |
| 5'-D(GP*TP*AP*CP*AP*CP*CP*GP*CP*AP*CP*A)-3' | y | 12 | NA | GTACACCGCACA |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2010-04-25 Deposition Author(s): Bax, B.D. , Brown, K.K. , Chan, P. , Eggleston, D.S. , Fosberry, A. , Gentry, D.R. , Giordano, I. , Gorrec, F. , Gwynn, M.N. , Hann, M.M. , Hennessy, A. , Hibbs, M. , Huang, J. , Jones, E. , Jones, J. , Lewis, C.J. , May, E. , Pearson, N.D. , Shen, C. , Shillings, A. , Singh, O. , Spitzfaden, C. , Theobald, A. , Wohlkonig, A.