2WW9
Cryo-em structure of the active yeast ssh1 complex bound to the yeast 80s ribosome
PDB DOI: 10.2210/pdb2ww9/pdb
Classification: RIBOSOME Organism(s): Saccharomyces Cerevisiae
Deposited: 2009-10-22 Deposition Author(s): Armache, J.P. , Becker, T. , Beckmann, R. , Berninghausen, O. , Bhushan, S. , Funes, S. , Gilmore, R. , Gumbart, J. , Jarasch, A. , Jossinet, F. , Mandon, E. , Mielke, T. , Schulten, K. , Westhof, E.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 8.6 Å
Cryo-em structure of the active yeast ssh1 complex bound to the yeast 80s ribosome
Armache, J.P. , Becker, T. , Beckmann, R. , Berninghausen, O. , Bhushan, S. , Funes, S. , Gilmore, R. , Gumbart, J. , Jarasch, A. , Jossinet, F. , Mandon, E. , Mielke, T. , Schulten, K. , Westhof, E.
Primary Citation of Related Structures: 2WW9
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| SEC SIXTY-ONE PROTEIN HOMOLOG | A | 490 | Saccharomyces Cerevisiae | MSGFRLIDIVKPILPILPEVELPFEKLPFDDKIVYTIFAGLIYLFAQFPLVGLPKATTPNVNDPIYFLRGVFGCEPRTLLEFGLFPNISSGLILQLLAGLKVIKVNFKIQSDRELFQSLTKVFAIVQYVILTNIFIFAGYFGDDLSVVQIGLINFQLVGAGIFTTLLAEVIDKGFGFSSGAMIINTVVIATNLVADTFGVSQIKVGEDDQTEAQGALINLIQGLRSKHKTFIGGIISAFNRDYLPNLTTTIIVLAIAIIVCYLQSVRVELPIRSTRARGTNNVYPIKLLYTGCLSVLFSYTILFYIHIFAFVLIQLVAKNEPTHIICKIMGHYENANNLLAVPTFPLSLLAPPTSFFKGVTQQPLTFITYSAFILVTGIWFADKWQAISGSSARDVALEFKDQGITLMGRREQNVAKELNKVIPIAAVTGASVLSLITVIGESLGLKGKAAGIVVGIAGGFSLLEVITIEYQQSGGQSALNQVLGVPGAM |
| 60S RIBOSOMAL PROTEIN L19 | J | 189 | Saccharomyces Cerevisiae | MANLRTQKRLAASVVGVGKRKVWLDPNETSEIAQANSRNAIRKLVKNGTIVKKAVTVHSKSRTRAHAQSKREGRHSGYGKRKGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLYHVLYKESKGNAFKHKRALVEHIIQAKADAQREKALNEEAEARRLKNRAARDRRAQRVAEKRDALLKEDA |
| 60S RIBOSOMAL PROTEIN L25 | K | 142 | Saccharomyces Cerevisiae | MAPSAKATAAKKAVVKGTNGKKALKVRTSATFRLPKTLKLARAPKYASKAVPHYNRLDSYKVIEQPITSETAMKKVEDGNILVFQVSMKANKYQIKKAVKELYEVDVLKVNTLVRPNGTKKAYVRLTADYDALDIANRIGYI |
| 60S RIBOSOMAL PROTEIN L26-A | L | 127 | Saccharomyces Cerevisiae | MAKQSLDVSSDRRKARKAYFTAPSSQRRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGSKKGQEGKISSVYRLKFAVQVDKVTKEKVNGASVPINLHPSKLVITKLHLDKDRKALIQRKGGKLE |
| 60S RIBOSOMAL PROTEIN L31-A | M | 113 | Saccharomyces Cerevisiae | MAGLKDVVTREYTINLHKRLHGVSFKKRAPRAVKEIKKFAKLHMGTDDVRLAPELNQAIWKRGVKGVEYRLRLRISRKRNEEEDAKNPLFSYVEPVLVASAKGLQTVVVEEDA |
| 60S RIBOSOMAL PROTEIN L35 | N | 120 | Saccharomyces Cerevisiae | MAGVKAYELRTKSKEQLASQLVDLKKELAELKVQKLSRPSLPKIKTVRKSIACVLTVINEQQREAVRQLYKGKKYQPKDLRAKKTRALRRALTKFEASQVTEKQRKKQIAFPQRKYAIKA |
| 60S RIBOSOMAL PROTEIN L39 | O | 51 | Saccharomyces Cerevisiae | MAAQKSFRIKQKMAKAKKQNRPLPQWIRLRTNNTIRYNAKRRNWRRTKMNI |
| PROTEIN TRANSPORT PROTEIN SSS1 | B | 80 | Saccharomyces Cerevisiae | MARASEKGEEKKQSNNQVEKLVEAPVEFVREGTQFLAKCKKPDLKEYTKIVKAVGIGFIAVGIIGYAIKLIHIPIRYVIV |
| PROTEIN TRANSPORT PROTEIN SEB2 | C | 87 | Saccharomyces Cerevisiae | MAASVPPGGQRILQKRRQAQSIKEKQAKQTPTSTRQAGYGGSSSSILKLYTDEANGFRVDSLVVLFLSVGFIFSVIALHLLTKFTHI |
| 60S RIBOSOMAL PROTEIN L4-B | H | 362 | Saccharomyces Cerevisiae | MSRPQVTVHSLTGEATANALPLPAVFSAPIRPDIVHTVFTSVNKNKRQAYAVSEKAGHQTSAESWGTGRAVARIPRVGGGGTGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHNEKRYATASAIAATAVASLVLARGHRVEKIPEIPLVVSTDLESIQKTKEAVAALKAVGAHSDLLKVLKSKKLRAGKGKYRNRRWTQRRGPLVVYAEDNGIVKALRNVPGVETANVASLNLLQLAPGAHLGRFVIWTEAAFTKLDQVWGSETVASSKVGYTLPSHIISTSDVTRIINSSEIQSAIRPAGQATQKRTHVLKKNPLKNKQVLLRLNPYAKVFAAEKLGSKKAEKTGTKPAAVFAETLKHD |
| 60S RIBOSOMAL PROTEIN L17-A | I | 184 | Saccharomyces Cerevisiae | MARYGATSTNPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLEQVLDHQRAIPFRRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAAANAEAKGLDATKLYVSHIQVNQAPKQRRRTYRAHGRINKYESSPSHIELVVTEKEEAVAKAAEKKVVRLTSRQRGRIAAQKRIAA |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2009-10-22 Deposition Author(s): Armache, J.P. , Becker, T. , Beckmann, R. , Berninghausen, O. , Bhushan, S. , Funes, S. , Gilmore, R. , Gumbart, J. , Jarasch, A. , Jossinet, F. , Mandon, E. , Mielke, T. , Schulten, K. , Westhof, E.