2WSE
Improved model of plant photosystem i
PDB DOI: 10.2210/pdb2wse/pdb
Classification: PHOTOSYNTHESIS Organism(s): Alternaria Alternata , Streptomyces Sp. Mg1 , Streptococcus Pyogenes Mgas5005 , Hepatitis B Virus Genotype D Subtype Adw , Gluconacetobacter Xylinus , Torpedo Californica
Deposited: 2009-09-05 Deposition Author(s): Amunts, A. , Borovikov, A. , Nelson, N. , Toporik, H.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.49 Å
Improved model of plant photosystem i
Amunts, A. , Borovikov, A. , Nelson, N. , Toporik, H.
Primary Citation of Related Structures: 2WSE
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| AT3G54890 | 1 | 241 | Alternaria Alternata , Streptomyces Sp. Mg1 , Streptococcus Pyogenes Mgas5005 , Hepatitis B Virus Genotype D Subtype Adw , Gluconacetobacter Xylinus , Torpedo Californica | MASNSLMSCGIAAVYPSLLSSSKSKFVSAGVPLPNAGNVGRIRMAAHWMPGEPRPAYLDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEWAALPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIPFN |
| PHOTOSYSTEM I REACTION CENTER SUBUNIT III, CHLOROPLASTIC | F | 231 | Alternaria Alternata , Streptomyces Sp. Mg1 , Streptococcus Pyogenes Mgas5005 , Hepatitis B Virus Genotype D Subtype Adw , Gluconacetobacter Xylinus , Torpedo Californica | MSFTIPTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAALALSSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIKATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVDNNF |
| PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC | G | 167 | Alternaria Alternata , Streptomyces Sp. Mg1 , Streptococcus Pyogenes Mgas5005 , Hepatitis B Virus Genotype D Subtype Adw , Gluconacetobacter Xylinus , Torpedo Californica | MAAATASLSSTLLAPCSSKQPQPQQQHQHQQLKCKSFSGLRPLKLNISSNNSSSSLSMSSARRSMTCRAELSPSLVISLSTGLSLFLGRFVFFNFQRENMAKQVPEQNGMSHFEAGDTRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATASNGYDPSFF |
| PHOTOSYSTEM I REACTION CENTER SUBUNIT VI, CHLOROPLASTIC | H | 144 | Alternaria Alternata , Streptomyces Sp. Mg1 , Streptococcus Pyogenes Mgas5005 , Hepatitis B Virus Genotype D Subtype Adw , Gluconacetobacter Xylinus , Torpedo Californica | MASLATLAAVQPTTLKGLAGSSIAGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFDLEDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSANAPQDVLPITRGPQQPPKLGPRGKI |
| PHOTOSYSTEM I REACTION CENTER SUBUNIT VIII | I | 40 | Alternaria Alternata , Streptomyces Sp. Mg1 , Streptococcus Pyogenes Mgas5005 , Hepatitis B Virus Genotype D Subtype Adw , Gluconacetobacter Xylinus , Torpedo Californica | MINLPSLFVPLVGLLFPAVAMASLFLHVEKRLLFSTKKIN |
| PHOTOSYSTEM I REACTION CENTER SUBUNIT IX | J | 44 | Alternaria Alternata , Streptomyces Sp. Mg1 , Streptococcus Pyogenes Mgas5005 , Hepatitis B Virus Genotype D Subtype Adw , Gluconacetobacter Xylinus , Torpedo Californica | MRDFKTYLSVAPVLSTLWFGSLAGLLIEINRFFPDALTFPFFSF |
| PHOTOSYSTEM I REACTION CENTER SUBUNIT PSAK, CHLOROPLASTIC | K | 131 | Alternaria Alternata , Streptomyces Sp. Mg1 , Streptococcus Pyogenes Mgas5005 , Hepatitis B Virus Genotype D Subtype Adw , Gluconacetobacter Xylinus , Torpedo Californica | MASQLSAMTSVPQFHGLRTYSSPRSMATLPSLRRRRSQGIRCDYIGSSTNLIMVTTTTLMLFAGRFGLAPSANRKATAGLKLEARESGIQTGDPAGFTLADTLACGAVGHIMGVGIVLGLKNTGVLDQIIG |
| PHOTOSYSTEM I REACTION CENTER SUBUNIT XI, CHLOROPLASTIC | L | 216 | Alternaria Alternata , Streptomyces Sp. Mg1 , Streptococcus Pyogenes Mgas5005 , Hepatitis B Virus Genotype D Subtype Adw , Gluconacetobacter Xylinus , Torpedo Californica | MAATTSPMASQLKSGFTTKALVVPKGISGPALRGFPSPRRHTSFTVRAIKTEKPTYQVIQPLNGDPFIGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEYAGAAGSLAAAGLVVILSMCLTMYGIASFKEGEPSIAPALTLTGRKKQPDQLQSADGWAKFTGGFFFGGVSGVTWACFLMYVLDLPYYFK |
| PHOTOSYSTEM I-N SUBUNIT | N | 170 | Alternaria Alternata , Streptomyces Sp. Mg1 , Streptococcus Pyogenes Mgas5005 , Hepatitis B Virus Genotype D Subtype Adw , Gluconacetobacter Xylinus , Torpedo Californica | MSAMNSTVLACNYARSGCSDLNAKLTSMPSVASPQLSALKLPLIKAHQAKVTESKSDQGRRSALVYLAATLFTAAAAASNSSANAGVIEEYLEKSKTNKELNDKKRLATTGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFLSDDLDLECEGKDKYKCGSNVFWKW |
| PHOTOSYSTEM I-N SUBUNIT | R | 53 | Alternaria Alternata , Streptomyces Sp. Mg1 , Streptococcus Pyogenes Mgas5005 , Hepatitis B Virus Genotype D Subtype Adw , Gluconacetobacter Xylinus , Torpedo Californica | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| TYPE II CHLOROPHYLL A/B BINDING PROTEIN FROM PHOTOSYSTEM I | 2 | 269 | Alternaria Alternata , Streptomyces Sp. Mg1 , Streptococcus Pyogenes Mgas5005 , Hepatitis B Virus Genotype D Subtype Adw , Gluconacetobacter Xylinus , Torpedo Californica | MASACASSAIAAVAISTPSSQKNGSPSGTSKAFLGRKLKVNSSTASPSRVRSTSTVCTVAEPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHSRWAMLGAAGIFIPEFLTKLGILNTPSWYTAGEQEYFTDTTTLFIVELVFIGWAEGRRWADILNPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSASPQKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAAHLADPHATIFAAFTPK |
| LHCA3 | 3 | 276 | Alternaria Alternata , Streptomyces Sp. Mg1 , Streptococcus Pyogenes Mgas5005 , Hepatitis B Virus Genotype D Subtype Adw , Gluconacetobacter Xylinus , Torpedo Californica | MAAQALVSSSSLTFSAEAARQSLGPRSLQSPFGFSRKASFLVKAAATPPVKQGSDRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETALPWFRTGFIPPAGTYNYWADSYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQALVTGVGPYQNLLDHLTDPVHNNILTSLKFH |
| CHLOROPHYLL A-B BINDING PROTEIN P4, CHLOROPLASTIC | 4 | 251 | Alternaria Alternata , Streptomyces Sp. Mg1 , Streptococcus Pyogenes Mgas5005 , Hepatitis B Virus Genotype D Subtype Adw , Gluconacetobacter Xylinus , Torpedo Californica | MATVTTQASAAIFGPCGLKSRFLGGSSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGIFNPLNFAPTLEAKEKEIANGRLMLAFLGFIIQHNVTGKGPFDNLLQHISDPWHNTIVQTLGGN |
| PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A1 | A | 758 | Alternaria Alternata , Streptomyces Sp. Mg1 , Streptococcus Pyogenes Mgas5005 , Hepatitis B Virus Genotype D Subtype Adw , Gluconacetobacter Xylinus , Torpedo Californica | MIIRSPEPKVQILADPEVKILVDRDPIKTSFEQWAKPGHFSRTIAKGPDTTTWIWNLHADAHDFDSHTSDLEEISRKVFSAHFGQLSIIFLWLSGMYFHGARFSNYEAWLNDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGALVFAGLMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWARHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWSKYADFLTFRGGLDPLTGGLWLTDIAHHHLAIAILFLIAGHMYRTNWGIGHGIKDILEAHKGPFTGQGHKGLYEILTTSWHAQLSINLAMLGSLTIVVAQHMYSMPPYPYLATDYATQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPGTTAPGATASTSLTWGGGDLVAVGNKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGTINDQGVVTHITAGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG |
| PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A2 | B | 734 | Alternaria Alternata , Streptomyces Sp. Mg1 , Streptococcus Pyogenes Mgas5005 , Hepatitis B Virus Genotype D Subtype Adw , Gluconacetobacter Xylinus , Torpedo Californica | MALRIPRFSQGIAQDPTTRRIWFGIATAHDFESHDDITEGRLYQNIFASHFGQLAIIFLWTSGNLFHVAWQGNFEAWVQDPFHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNNAYSGVYQWWYTIGLRTNEDLYTGAIFLLFLSFISLLAGWLHLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWAGHLVHVAIPGSRGEYVRWNNFLDVLPYPQGLGPLLTGQWNLYAQNPSSSNHLFGTTQGAGTAILTILGGFHPQTQSLWLTDVAHHHLAIAFLFLIGGLMYRTNFGIGHSIKYILEAHIPPGGRLGRGHKGLYDTINNSIHFQLGLALASLGVITSLVAQHMYSLPAYAFIAQDFTTQAALYTHHQYIAGFIMTGAFAHGPIFFIRDYNPEQNADNVLARMLEHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGKTTYGFDIPLSSTNGPALNAGRNIWLPGWLNAINENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDDFYLAVFWMLNTIGWVTFYWHWKHITLWRGNVSQFNESSTYLMGWLRDYLWLNSSQLINGITPLVCNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLVHFSVGYIFTYAAFLIASTSGKFG |
| PHOTOSYSTEM I IRON-SULFUR CENTER | C | 81 | Alternaria Alternata , Streptomyces Sp. Mg1 , Streptococcus Pyogenes Mgas5005 , Hepatitis B Virus Genotype D Subtype Adw , Gluconacetobacter Xylinus , Torpedo Californica | MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY |
| PHOTOSYSTEM I REACTION CENTER SUBUNIT II, CHLOROPLASTIC | D | 212 | Alternaria Alternata , Streptomyces Sp. Mg1 , Streptococcus Pyogenes Mgas5005 , Hepatitis B Virus Genotype D Subtype Adw , Gluconacetobacter Xylinus , Torpedo Californica | MAMGTPATLFSRSSLSSAKPIETRLTTSFKQPSAVTFASKPASRLHTIRAAAAAEGKAAAATETKEATKAFTPPELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYPEKVNPGRQGVGLNMRSIGKNVSPIEVKFTGKQPYDL |
| PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A, CHLOROPLASTIC | E | 143 | Alternaria Alternata , Streptomyces Sp. Mg1 , Streptococcus Pyogenes Mgas5005 , Hepatitis B Virus Genotype D Subtype Adw , Gluconacetobacter Xylinus , Torpedo Californica | MAMTTASTVFVLPANVTSVAGASSSRSSVSFLPMRNAGSRLVVRAAEDPAPASSSSKDSPAAAAAPDGATATKPKPPPIGPKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEVAA |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2009-09-05 Deposition Author(s): Amunts, A. , Borovikov, A. , Nelson, N. , Toporik, H.