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FASTA Sequence PDB Format mmCIF Format
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2W9C

Ternary complex of dpo4 bound to n2,n2-dimethyl-deoxyguanosine modified dna with incoming dttp

PDB DOI: 10.2210/pdb2w9c/pdb

Classification: TRANSFERASE/DNA
Organism(s): Sulfolobus Solfataricus , Synthetic Construct

Deposited: 2009-01-22
Deposition Author(s): Egli, M. , Eoff, R.L. , Guengerich, F.P. , Kosekov, I.D. , Rizzo, C.J. , Zhang, H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.9 Å

2w9c
Literature

Ternary complex of dpo4 bound to n2,n2-dimethyl-deoxyguanosine modified dna with incoming dttp

Egli, M. , Eoff, R.L. , Guengerich, F.P. , Kosekov, I.D. , Rizzo, C.J. , Zhang, H.

Primary Citation of Related Structures: 2W9C


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA POLYMERASE IV A 358 Sulfolobus Solfataricus , Synthetic Construct HHHHHHMIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKARYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFIEAIGLDKFFDT
DNA POLYMERASE IV B 358 Sulfolobus Solfataricus , Synthetic Construct HHHHHHMIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFIEAIGLDKFFDT

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP *TP*TP*DOCP)-3' c 13 NA GGGGGAAGGATTC
5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP *TP*TP*DOCP)-3' d 13 NA GGGGGAAGGATTC
5'-D(*TP*CP*AP*CP*O2GP*GP*AP*AP*TP*CP*CP *TP*TP*CP*CP*CP*CP*C)-3' e 18 NA TCACGGAATCCTTCCCCC
5'-D(*TP*CP*AP*CP*O2GP*GP*AP*AP*TP*CP*CP *TP*TP*CP*CP*CP*CP*C)-3' f 18 NA TCACGGAATCCTTCCCCC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2009-01-22
Deposition Author(s): Egli, M. , Eoff, R.L. , Guengerich, F.P. , Kosekov, I.D. , Rizzo, C.J. , Zhang, H.