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2W8L

Y-family dna polymerase dpo4 bypassing n2-naphthyl-guanine adduct in anti orientation

PDB DOI: 10.2210/pdb2w8l/pdb

Classification: TRANSFERASE/DNA
Organism(s): Sulfolobus Solfataricus , Synthetic Construct

Deposited: 2009-01-16
Deposition Author(s): Egli, M. , Eoff, R.L. , Guengerich, F.P. , Zhang, H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3 Å

2w8l
Literature

Y-family dna polymerase dpo4 bypassing n2-naphthyl-guanine adduct in anti orientation

Egli, M. , Eoff, R.L. , Guengerich, F.P. , Zhang, H.

Primary Citation of Related Structures: 2W8L


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA POLYMERASE IV A 358 Sulfolobus Solfataricus , Synthetic Construct HHHHHHMIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFIEAIGLDKFFDT

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP *TP*TP*CP*DOC)-3' p 14 NA GGGGGAAGGATTCC
5'-D(*TP*CP*AP*CP*N2GP*GP*AP*AP*TP*CP *CP*TP*TP*CP*CP*CP*CP*C)-3' t 18 NA TCACXGAATCCTTCCCCC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2009-01-16
Deposition Author(s): Egli, M. , Eoff, R.L. , Guengerich, F.P. , Zhang, H.